Gene Ssed_3741 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsed_3741 
Symbol 
ID5611229 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sediminis HAW-EB3 
KingdomBacteria 
Replicon accessionNC_009831 
Strand
Start bp4555305 
End bp4556390 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content41% 
IMG OID640934695 
ProductFAD-dependent pyridine nucleotide-disulfide oxidoreductase 
Protein accessionYP_001475473 
Protein GI157376873 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2072] Predicted flavoprotein involved in K+ transport 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGCACA TAATAATAAC TATATGCACG CATTTGGGAT CCATGAAAGA ATTTATCATC 
ATTGGGGCTG GTCAGTCTGG ACTGGCTATG GCTTATAACT TATCCAAAAA TAATAAAGAC
TACTTAATTT TAGATGCCAA TGAACACATT GGCGCACCTT GGCTAAAGCG TTGGGATTCT
TTAAAGCTCT TTACCCCCAC AGAATACAAC CACCTTCCAG GTATGCCATT TCCGTTTCCT
AAAGGGTATT ACCCCAATAA ATATGAAGTG GCAGACTACT TAAAAAGTTA TGTTGAAAAA
TTTTCGATGC CGATTGAATT CAATCAAAGA ATCACCTCGG TAAAGAAAGT TGATGGTATT
TTTGAAATAA CCAGTGGTAC GGCAAGCTAT CAAGCCAAAC AGCTCATTAT CGCCACGGGC
CCCTTCCACA CGCCCTATAC TCCCGCTTGC CATGTTGATA TCGCGGAGAA TATTACTCAG
TTACATAGTG AAAACTATAA AAGTCCTGAA CAGCTGCAAG ATGGTGACTG TTTAGTGGTA
GGTGCCGGAG ATTCTGGGGT GCAAATTTTA TCAGAGATTG CCGATACAGG ACGTAAAGTG
CACTTCTCCG GTACTGATAA AATTACCGCT ATCCCACAGT CATTTTTAGG TAAAACCTTG
TGGTGGTGGT TCACTAAAAT CGGCTTTTTA TCCGTTACCC GTTTTAGCAA AATGGGCAAA
TGGTTGAGCA AGGGTGTGCA GCCCGTTATT GGTACTGACG TGAAGTCACT TCTAGCCAAA
ACGAATGTGA TTCATATGGG AAGAACATTG TCAGCCGATG AAACGAGTAT CAAGTTTCAA
AAAGGCAGCA TCAGCAGTAT CAAAAATATT ATTTGGGCTA CAGGCTTCAA GCCTAACTTC
TTTTGGATTG AAGATATCTC TTTTGATGAA ATGAACTACC CGAGCAATTA TCGTGGGGTC
AGTAAAGACG TTGATGGATT ATATTTTATT GGCTTACCTT GGCTATACAC CCGAGGCTCA
GCAACACTCG GCGGCGTATG GAAAGATGCC AAATATTTAA TGACCCATAT TCAGGAAAAT
AAATAA
 
Protein sequence
MLHIIITICT HLGSMKEFII IGAGQSGLAM AYNLSKNNKD YLILDANEHI GAPWLKRWDS 
LKLFTPTEYN HLPGMPFPFP KGYYPNKYEV ADYLKSYVEK FSMPIEFNQR ITSVKKVDGI
FEITSGTASY QAKQLIIATG PFHTPYTPAC HVDIAENITQ LHSENYKSPE QLQDGDCLVV
GAGDSGVQIL SEIADTGRKV HFSGTDKITA IPQSFLGKTL WWWFTKIGFL SVTRFSKMGK
WLSKGVQPVI GTDVKSLLAK TNVIHMGRTL SADETSIKFQ KGSISSIKNI IWATGFKPNF
FWIEDISFDE MNYPSNYRGV SKDVDGLYFI GLPWLYTRGS ATLGGVWKDA KYLMTHIQEN
K