Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_3741 |
Symbol | |
ID | 5611229 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | - |
Start bp | 4555305 |
End bp | 4556390 |
Gene Length | 1086 bp |
Protein Length | 361 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640934695 |
Product | FAD-dependent pyridine nucleotide-disulfide oxidoreductase |
Protein accession | YP_001475473 |
Protein GI | 157376873 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2072] Predicted flavoprotein involved in K+ transport |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGCACA TAATAATAAC TATATGCACG CATTTGGGAT CCATGAAAGA ATTTATCATC ATTGGGGCTG GTCAGTCTGG ACTGGCTATG GCTTATAACT TATCCAAAAA TAATAAAGAC TACTTAATTT TAGATGCCAA TGAACACATT GGCGCACCTT GGCTAAAGCG TTGGGATTCT TTAAAGCTCT TTACCCCCAC AGAATACAAC CACCTTCCAG GTATGCCATT TCCGTTTCCT AAAGGGTATT ACCCCAATAA ATATGAAGTG GCAGACTACT TAAAAAGTTA TGTTGAAAAA TTTTCGATGC CGATTGAATT CAATCAAAGA ATCACCTCGG TAAAGAAAGT TGATGGTATT TTTGAAATAA CCAGTGGTAC GGCAAGCTAT CAAGCCAAAC AGCTCATTAT CGCCACGGGC CCCTTCCACA CGCCCTATAC TCCCGCTTGC CATGTTGATA TCGCGGAGAA TATTACTCAG TTACATAGTG AAAACTATAA AAGTCCTGAA CAGCTGCAAG ATGGTGACTG TTTAGTGGTA GGTGCCGGAG ATTCTGGGGT GCAAATTTTA TCAGAGATTG CCGATACAGG ACGTAAAGTG CACTTCTCCG GTACTGATAA AATTACCGCT ATCCCACAGT CATTTTTAGG TAAAACCTTG TGGTGGTGGT TCACTAAAAT CGGCTTTTTA TCCGTTACCC GTTTTAGCAA AATGGGCAAA TGGTTGAGCA AGGGTGTGCA GCCCGTTATT GGTACTGACG TGAAGTCACT TCTAGCCAAA ACGAATGTGA TTCATATGGG AAGAACATTG TCAGCCGATG AAACGAGTAT CAAGTTTCAA AAAGGCAGCA TCAGCAGTAT CAAAAATATT ATTTGGGCTA CAGGCTTCAA GCCTAACTTC TTTTGGATTG AAGATATCTC TTTTGATGAA ATGAACTACC CGAGCAATTA TCGTGGGGTC AGTAAAGACG TTGATGGATT ATATTTTATT GGCTTACCTT GGCTATACAC CCGAGGCTCA GCAACACTCG GCGGCGTATG GAAAGATGCC AAATATTTAA TGACCCATAT TCAGGAAAAT AAATAA
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Protein sequence | MLHIIITICT HLGSMKEFII IGAGQSGLAM AYNLSKNNKD YLILDANEHI GAPWLKRWDS LKLFTPTEYN HLPGMPFPFP KGYYPNKYEV ADYLKSYVEK FSMPIEFNQR ITSVKKVDGI FEITSGTASY QAKQLIIATG PFHTPYTPAC HVDIAENITQ LHSENYKSPE QLQDGDCLVV GAGDSGVQIL SEIADTGRKV HFSGTDKITA IPQSFLGKTL WWWFTKIGFL SVTRFSKMGK WLSKGVQPVI GTDVKSLLAK TNVIHMGRTL SADETSIKFQ KGSISSIKNI IWATGFKPNF FWIEDISFDE MNYPSNYRGV SKDVDGLYFI GLPWLYTRGS ATLGGVWKDA KYLMTHIQEN K
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