| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3730 |
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| Symbol | |
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| ID | 5610288 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 4537471 |
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| End bp | 4538085 |
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| Gene Length | 615 bp |
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| Protein Length | 204 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640934684 |
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| Product | cob(I)yrinic acid a,c-diamide adenosyltransferase |
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| Protein accession | YP_001475462 |
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| Protein GI | 157376862 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG2109] ATP:corrinoid adenosyltransferase |
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| TIGRFAM ID | [TIGR00708] cob(I)alamin adenosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.250258 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0476362 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCGAAA AAAATGCAGA AGAGATAAAA GCGCAGCGTC ATAAAGCACG TCAACAGAAG
CTCAAAGATG GAGTCGATGC GAAAATAGCC AAGGCTCAGG AGGAGAAGGG CATTCTGTTG
GTGCTGACAG GTAATGGTAA AGGTAAATCG ACCTCTGGCT TCGGCACTAT TGCCCGCTCA
GTAGGCCATG GTAAGAAAGC GGCTGTGGTG CAGTTCATTA AGGGAAACTG GGATTGCGGT
GAACGCACTC TGCTCGAAGG GGCCGGAGTC GAGTTTCATG TGATGGGCAC CGGGTTTACC
TGGGAGACTC AAGACAGGGA GAAGGACACG GCAGCGGCAC TAGAGGCATG GGAAGCTGCA
GAGAAACTAC TCAAAGACGA GTCTATAGAT TGCATCATGC TGGATGAACT CACTTACATG
GTGAGTTATC ACTACCTGGA GGTCGATAGA GTGATCGAAG CACTACAGAA TCGTCCACCG
ATGCAGCATG TTATCGTCAC GGGAAGGGCG TGTCACAGAG GTATTATTGA GATAGCGGAT
ACAGTGAGTG AGGTAAAGCC CATAAAACAC GCCTTCGATG CAGGCGTCAA AGCCCAGCCC
GGTTTCGACT ACTAA
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| Protein sequence | MTEKNAEEIK AQRHKARQQK LKDGVDAKIA KAQEEKGILL VLTGNGKGKS TSGFGTIARS
VGHGKKAAVV QFIKGNWDCG ERTLLEGAGV EFHVMGTGFT WETQDREKDT AAALEAWEAA
EKLLKDESID CIMLDELTYM VSYHYLEVDR VIEALQNRPP MQHVIVTGRA CHRGIIEIAD
TVSEVKPIKH AFDAGVKAQP GFDY
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