Gene Ssed_3715 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsed_3715 
Symbol 
ID5613830 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sediminis HAW-EB3 
KingdomBacteria 
Replicon accessionNC_009831 
Strand
Start bp4520372 
End bp4520749 
Gene Length378 bp 
Protein Length125 aa 
Translation table11 
GC content45% 
IMG OID640934668 
Producthypothetical protein 
Protein accessionYP_001475447 
Protein GI157376847 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTAATG AGCGACATGG AATTTCAATC GGTATAGAAC GCAATGGTGA TGATTTTTAT 
CTATCATTTG TTGCGACTGG CAGTCTGACC CACGAAGATT ATGAGCAGAT GGTTCCCTTG
TTAGAGTCCG CGCTCATTGG AATTAGAGAG CCCGATATTC ACGCCCTTGC AGATCTTAGG
GGCTTGAAAG GGATGTCGCT TCATGCTGTA TGGGACGATC TTAAGCTAGG ATTTTCTCAT
GGTAAAGAAT TCAAGAAGAT GGCGATATTG GGTAAAGGTG GTCTGCAGGA GTGGATGTCT
AAAATGGCGG ATTGGTTTAC GCCTGGGGAG ATTAGGTTCT TTGAGGGCAA AGAAGAGGCC
TTAAATTGGC TTAAGTAA
 
Protein sequence
MGNERHGISI GIERNGDDFY LSFVATGSLT HEDYEQMVPL LESALIGIRE PDIHALADLR 
GLKGMSLHAV WDDLKLGFSH GKEFKKMAIL GKGGLQEWMS KMADWFTPGE IRFFEGKEEA
LNWLK