Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_3715 |
Symbol | |
ID | 5613830 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | - |
Start bp | 4520372 |
End bp | 4520749 |
Gene Length | 378 bp |
Protein Length | 125 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640934668 |
Product | hypothetical protein |
Protein accession | YP_001475447 |
Protein GI | 157376847 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGTAATG AGCGACATGG AATTTCAATC GGTATAGAAC GCAATGGTGA TGATTTTTAT CTATCATTTG TTGCGACTGG CAGTCTGACC CACGAAGATT ATGAGCAGAT GGTTCCCTTG TTAGAGTCCG CGCTCATTGG AATTAGAGAG CCCGATATTC ACGCCCTTGC AGATCTTAGG GGCTTGAAAG GGATGTCGCT TCATGCTGTA TGGGACGATC TTAAGCTAGG ATTTTCTCAT GGTAAAGAAT TCAAGAAGAT GGCGATATTG GGTAAAGGTG GTCTGCAGGA GTGGATGTCT AAAATGGCGG ATTGGTTTAC GCCTGGGGAG ATTAGGTTCT TTGAGGGCAA AGAAGAGGCC TTAAATTGGC TTAAGTAA
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Protein sequence | MGNERHGISI GIERNGDDFY LSFVATGSLT HEDYEQMVPL LESALIGIRE PDIHALADLR GLKGMSLHAV WDDLKLGFSH GKEFKKMAIL GKGGLQEWMS KMADWFTPGE IRFFEGKEEA LNWLK
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