| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3713 |
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| Symbol | |
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| ID | 5613828 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 4519294 |
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| End bp | 4519737 |
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| Gene Length | 444 bp |
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| Protein Length | 147 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640934666 |
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| Product | UspA domain-containing protein |
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| Protein accession | YP_001475445 |
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| Protein GI | 157376845 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTACTC GTCAAATTTT ATGCCCTACT GATTTTTCTG AGACAGCTTC GCATGCCTTA
AGCTATGCCA TCGAGATGGC AAATCTATAT CAGGTAAATA TCAGACTTGT ACATGTTATG
AGTAAGCCTT ATGGCGAACA CAATTACGGG ATCATTGTTG AGAGCCCCGA AGAGCTTGAG
ACGCAGCTGG AAGCCTATTC AGAGGAAAAA CTCACTGAGT TGGTTGCTCA AATTGAACCT
GCTTTAGATG ACGTATTGAG TGTGACACCT GTGATCAGAA GTGGTGATAT TTTCGCTAAC
ATATTAGAAG ACAGCGTGGA AAATGAGGTC GGAATGATTG TTATCGCCAG CCATGGTCAT
ACAGGCTTGT CTCATATGCT GAATCCTAAT GTGGCTGAGG CTCTGGCGAA TAAGGCTAAG
TGCCCGGTAT TGGTTGTTAA ATAA
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| Protein sequence | MRTRQILCPT DFSETASHAL SYAIEMANLY QVNIRLVHVM SKPYGEHNYG IIVESPEELE
TQLEAYSEEK LTELVAQIEP ALDDVLSVTP VIRSGDIFAN ILEDSVENEV GMIVIASHGH
TGLSHMLNPN VAEALANKAK CPVLVVK
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