| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3704 |
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| Symbol | |
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| ID | 5610142 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 4508413 |
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| End bp | 4509033 |
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| Gene Length | 621 bp |
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| Protein Length | 206 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640934657 |
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| Product | hypothetical protein |
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| Protein accession | YP_001475436 |
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| Protein GI | 157376836 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3803] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.377391 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGGTTA CGGTTAGGCC AGCCAAGGAG AGTCAGACAT TGAACAGCAG CAATCAAGTT
AATAATCAAA GCATTATTAA TATGACCCCG GATACCATCA TCCACTTCTG GTTTGAAGAG
ATAGATCCTA AACTCTGGTG GGTTAAAGAC ACCCAGTTCG ATAGCCTGCT CGAAGACAGG
TTTGGTGAGT TAGTCCAGCA GGCCAAACGT GGAGAGCTAT ACCATTGGCG CACGACACCT
GAGGGGCGGC TTGCCGAGAT CATCGTGCTA GATCAGTTCA GCCGCAACAT CTATCGTGAT
ACGCCAGAGT CATTCGCCGC CGATCCCATG GCACTGACCT TAGCCCAAGA GGCTGTTGCA
CTAAATATCG ATACTGAGCT TAAAGGCAAA CAGATCCCTT TTCTGTTTAT GCCCTATATG
CACAGTGAAT CCCCTCGCAT CCACGAGGTT GCGATGATCT TGTTTAGTCG GGAGTCGGCC
AAGGGGAATC TGGAGTTCGA ACGTCGCCAT AAAATCATCA TAGATCGCTT CGGAAGGTAC
CCTCACAGGA ACGAGATCCT CGGACGAGAA TCGACGGCGG TCGAGCTGGA GTTTTTGTCA
CAACCGGGCT CGAGTTTTTA G
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| Protein sequence | MSVTVRPAKE SQTLNSSNQV NNQSIINMTP DTIIHFWFEE IDPKLWWVKD TQFDSLLEDR
FGELVQQAKR GELYHWRTTP EGRLAEIIVL DQFSRNIYRD TPESFAADPM ALTLAQEAVA
LNIDTELKGK QIPFLFMPYM HSESPRIHEV AMILFSRESA KGNLEFERRH KIIIDRFGRY
PHRNEILGRE STAVELEFLS QPGSSF
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