| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3692 |
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| Symbol | |
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| ID | 5613992 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 4493653 |
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| End bp | 4494309 |
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| Gene Length | 657 bp |
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| Protein Length | 218 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640934645 |
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| Product | lysine exporter protein (LysE/YggA) |
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| Protein accession | YP_001475424 |
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| Protein GI | 157376824 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1280] Putative threonine efflux protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTTTTA CTGCCTGGCT GAGTTTACTG GCCATCTGCT GTTTGGGCGC TATGTCGCCG
GGTCCGAGTC TGGCTATGGT TGTGCGTCAC ACACTGACGG GGGGCCGTGG TAAAGGCATA
CTCTGTGCCT GGGCGCATTC CATCGGTATT GGCTTGTATG CGTTAGTGAC ATTACTGGGA
CTGGCCGTCG TGCTCAAACA GGCGCCTATG GTATTTAATG GTATTGCGAT TATCGGTGCA
CTTTATCTGG CCTGGATGGG GGTTAAAGCA TTAGGTTCTA AGGGAGGCAT ATCGGATAAG
TTAGATGCCG GAAATGGCTC AGATAGTGCC TCATCAACAG AACCAGCGGG TCATTCGAGG
GCTGCGACAT TCGCGGCGGC ACGAGATGGC TTAGCGATTT CGTTATTCAA CCCTAAAATA
ATGCTGTTCT TCCTGGCCCT GTTCAGCCAG TTTGTTATGG CCGCCGAGAG TCTGTTTGGT
CAGTCATTAA TTGTATTCAC GCCACTGATT ATCGATGGCC TCTGGTACAC CTTTATTGCG
CTTATTCTGT CACACCCTTC GGTGTTGCCT AAGCTCAGAG CAAAGGCTGC CATCATAGAT
AAACTCTCGG GTGTAGTACT CATCCTGTTG GCCATTCGGG TGATAGTGAC AATTTAG
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| Protein sequence | MSFTAWLSLL AICCLGAMSP GPSLAMVVRH TLTGGRGKGI LCAWAHSIGI GLYALVTLLG
LAVVLKQAPM VFNGIAIIGA LYLAWMGVKA LGSKGGISDK LDAGNGSDSA SSTEPAGHSR
AATFAAARDG LAISLFNPKI MLFFLALFSQ FVMAAESLFG QSLIVFTPLI IDGLWYTFIA
LILSHPSVLP KLRAKAAIID KLSGVVLILL AIRVIVTI
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