Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_3678 |
Symbol | |
ID | 5613489 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | - |
Start bp | 4484018 |
End bp | 4484584 |
Gene Length | 567 bp |
Protein Length | 188 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640934631 |
Product | YecA family protein |
Protein accession | YP_001475410 |
Protein GI | 157376810 |
COG category | [S] Function unknown |
COG ID | [COG3079] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR02292] yecA family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTACCC CTCCCTCTTT ACGTATAGAC AACTTAATGG CAGCACTCGA CGCGGCAGAA ATTGGTCAGC AGCCGGGTGA AGTACATGGC GCGCTTGTGG GCTTGATTTG CGGCGGTGTC GAGCAATCAA AAAAGGCATG GAATAGTACA TTTCTGGAGC TGATGAATGA TGGTCAGCCT CTGCCCGATG CATTGCAGCA ACTCATCGAT GAGCTCTATC AGGATACCCT GGCAAGATTA TCGGATGCCG ATTTTGGCTT TACCCCTATG CTGCCTGAAG AGGAGGAGCC CTTAGCCAAA CGTGTCGAGG CACTTTCTCT ATGGGTACAA AGCTTCCTGA CCGGTATCGC CATGGTTCAG CCCAAGCTGA ACAGGGCGTC GAGTGATGTT CAGGAGGTCA TTAAAGATCT TGCCGAAATC GCCTTGGTAG AATTTGATGT CGCCGATGAT GACGAGTCTG AGTCTGCATA CATGGAACTG ATGGAGTTCT CTAAGATGGC AGCCTTGCTC TGCTACTCAG AGTTTGGCCC TGAGCCCACA GAGCAAGAAG CGGGTGTTAT TCACTAA
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Protein sequence | MATPPSLRID NLMAALDAAE IGQQPGEVHG ALVGLICGGV EQSKKAWNST FLELMNDGQP LPDALQQLID ELYQDTLARL SDADFGFTPM LPEEEEPLAK RVEALSLWVQ SFLTGIAMVQ PKLNRASSDV QEVIKDLAEI ALVEFDVADD DESESAYMEL MEFSKMAALL CYSEFGPEPT EQEAGVIH
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