| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3677 |
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| Symbol | |
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| ID | 5613834 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 4482635 |
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| End bp | 4483882 |
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| Gene Length | 1248 bp |
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| Protein Length | 415 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640934630 |
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| Product | 2-polyprenyl-6-methoxyphenol 4-hydroxylase |
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| Protein accession | YP_001475409 |
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| Protein GI | 157376809 |
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| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0654] 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases |
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| TIGRFAM ID | [TIGR01984] 2-polyprenyl-6-methoxyphenol 4-hydroxylase
[TIGR01988] Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGCTC AAACTGAACA AGATACCAGC CAAACGATTA ATGTTGTCGA TGTCGCCATC
GTTGGCGGCG CGATGGCCGG GGCCACCTTG GCCTTAGGGT TAAAGGCGTT GGCTAAAGAC
CTTCAAAGAC CACTCAAGAT TGCCCTTATC GAGGCTCACC GCCCCGATGA CAATCACCCT
GGTTTCGATG CGCGTTCAAT TGCCGTTGCC CACGGCTCTA TCTTCGAGCT GAATCGACTC
GGTATCTGGC CAAAGATTGC CCATCTTGGC ACCCCTATAG AGAACATTCA TATTTCAGAT
CGTGGGCATT TCGGCATGAC AGAGCTCAAT GCCGATGACT TCTATCTTAA GTATCTGGGT
CAGGTGATCG AACTCGAGCC GGTGGGGCAG GTGCTGTTTA AGCAGATAGC CGATACCGAC
ATCGAGCTCT ATTGCCCGGC CAAACTAGCC TCGGTTGAGG CACAAACCGA TGCTCAGCTG
CTGACACTCG ATGATGGCAC ACAATTGAGT ACATCACTGC TGGTTGCTGC CGATGGGGTT
AACTCTAAAG TCAGGCAGGC ATTTAAACAG CCTCTCGAAC AGGTCGACTT CGATCAGGTT
GCACTCATCG CGAATGTTGA AACGGATACC CCCCATGAAC AGAGGGCGTT CGAGCGTTTC
ACAGATTCCG GCCCTCTGGC TATTCTGCCC ATGTCTAAGT CTAAAGGGGT CAACAGGGTC
TCCTTGGTGT GGGCATTGAG GCCCGATGAT GCCGAGCGTT TAATGTCTGT GTCTAAAGAT
GAGTTCCTTG CCGAGTTGCA GCAGGCATTT GGCTATCGCG CCGGTCAGTT TACCGGTGTC
GGCGAACGCC ACTCCTATCC TTTGTTGCTC TCGCACATGC CAAGGCCTAT CTACCATCGC
ACCGTCTTTA TTGGTAATGC GGCGCAGACG CTGCATCCCA TCGCGGGTCA GGGATTTAAC
TTAGGTCTGA GAGATCTGGT GAGCCTACTC GAAGTGCTAA AGCAGACTAT AGAAAGTGAA
GCCAGTGATG AGTTGGATTT TGGCAGTGCT CAAGTCACTC ATAAATATCT GCAAAGCCGG
GAAGCGGATC GAAGCGCAAC CATGACAAAT ATTGAGTTTC TGGTGCGGGG CTTCTCTAAT
GACTATTGGC CGCTCGTCGC CGGGCGAAGT CTGGCATTGA GGTTACTCTC TTGGCTGCCG
CCACTGAAGA CGCCTATAGC GCGTAGTGCG ATGGGGTGGA GATCATAA
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| Protein sequence | MKAQTEQDTS QTINVVDVAI VGGAMAGATL ALGLKALAKD LQRPLKIALI EAHRPDDNHP
GFDARSIAVA HGSIFELNRL GIWPKIAHLG TPIENIHISD RGHFGMTELN ADDFYLKYLG
QVIELEPVGQ VLFKQIADTD IELYCPAKLA SVEAQTDAQL LTLDDGTQLS TSLLVAADGV
NSKVRQAFKQ PLEQVDFDQV ALIANVETDT PHEQRAFERF TDSGPLAILP MSKSKGVNRV
SLVWALRPDD AERLMSVSKD EFLAELQQAF GYRAGQFTGV GERHSYPLLL SHMPRPIYHR
TVFIGNAAQT LHPIAGQGFN LGLRDLVSLL EVLKQTIESE ASDELDFGSA QVTHKYLQSR
EADRSATMTN IEFLVRGFSN DYWPLVAGRS LALRLLSWLP PLKTPIARSA MGWRS
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