| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3676 |
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| Symbol | |
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| ID | 5613833 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 4481364 |
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| End bp | 4482578 |
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| Gene Length | 1215 bp |
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| Protein Length | 404 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640934629 |
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| Product | UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase |
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| Protein accession | YP_001475408 |
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| Protein GI | 157376808 |
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| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0654] 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases |
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| TIGRFAM ID | [TIGR01988] Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGAGTA CACAAACCTA TGATGTCGCC ATTATCGGCG GAGGAATGGT CGGGCTGGCT
ACCGCTATCG GGCTGGCAAT GGAAGAGTTA CGGGTCGTGG TTATCGATGC CGGTGAAACT
CATGCCGTCT CGGGGGAAGC CAGACTCAGG GTGAGTGCAA TCAACAAGGC CAGCCAGCGA
TTACTGCAGA ATCTGGGCGC CTGGAGTTAT CTGGACAGCG AACGTCTCAG TCCCTATCAA
AAGATGGAGG TGTGGGATAA GGATAGCTTG GGGAAAATCG GTTTCGATGC CCACTCGCTC
AGCGAGCAGC ACCTTGGCAG TATCATAGAA AATGACAACA TCAGTTTCGC CCTGGCAAAG
AGAGCGGCCG AACTTGACCA AATTACTCAC CTCGAGAATC ACCGTCTGGA GAAAATCGCC
TTCGGTGAAC GCGAAGCCTG GTTAACGCTG GACAACGGCG ACAACCTCAG CGCCGCATTG
GTGATAGGTG CAGACGGCGC TAACTCCTGG GTACGTGAGC AGTGCAAAAT TCCGATGACA
TTCTGGGATT ATGGCCATCA CGCCATCGTT GCCAGCATAC GCACCGAGAT CCCTCACTTA
GACACCGCAA GGCAGGTCTT TCTGGATGAA GGGCCATTAG CCTTCCTGCC TCTGTATGAA
TCCAACCTCT GCTCTATCGT CTGGTCGGTG CCGCCTGCAA AGGCTAAAAA GCTGCTCGAG
GCCGACAAGT TGGAGTTTGA ACATACATTA ACGGCCGAGT TCGATGGTCG CATGGGGATG
TGCCATCTGG AGGGGGAGCC ACAGGCCTTC CCGCTCAGAA TGCGTTATGC CCGTCACTTT
GCCCGTCACC GCCTGCTACT GGCCGGCGAT GCGGCGCACA CCATACACCC GTTAGCGGGG
CAGGGGGTCA ACTTAGGCTT CCTGGATGCG GCAGCCATTA TTCAGACTAT CGGCGAGCTG
AAACTCGATG GTAAAGATAT CGGCGACTAT GGCAATCTGC GCGCATTAGA GCGTTGGAGA
AAGGCCGACG CACTGGAGAT GATCGCGGCG ATGGAGGGCT TTAAACGCCT CTTCGAGGGG
AGCAATCCGG TGAAGAAAGC CCTGCGGGAT TTCGGTCTGA ATTTGGTCGA TAATATTTCT
CCTGTGAAAA CACTGTTTAT GCAACAGGCG ATGGGTAATA AAAGCAGCCT GCCCAAACTC
TGCAAAGCAG AATAG
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| Protein sequence | MLSTQTYDVA IIGGGMVGLA TAIGLAMEEL RVVVIDAGET HAVSGEARLR VSAINKASQR
LLQNLGAWSY LDSERLSPYQ KMEVWDKDSL GKIGFDAHSL SEQHLGSIIE NDNISFALAK
RAAELDQITH LENHRLEKIA FGEREAWLTL DNGDNLSAAL VIGADGANSW VREQCKIPMT
FWDYGHHAIV ASIRTEIPHL DTARQVFLDE GPLAFLPLYE SNLCSIVWSV PPAKAKKLLE
ADKLEFEHTL TAEFDGRMGM CHLEGEPQAF PLRMRYARHF ARHRLLLAGD AAHTIHPLAG
QGVNLGFLDA AAIIQTIGEL KLDGKDIGDY GNLRALERWR KADALEMIAA MEGFKRLFEG
SNPVKKALRD FGLNLVDNIS PVKTLFMQQA MGNKSSLPKL CKAE
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