| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3675 |
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| Symbol | gcvT |
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| ID | 5613832 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 4479956 |
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| End bp | 4481050 |
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| Gene Length | 1095 bp |
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| Protein Length | 364 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640934628 |
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| Product | glycine cleavage system aminomethyltransferase T |
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| Protein accession | YP_001475407 |
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| Protein GI | 157376807 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0404] Glycine cleavage system T protein (aminomethyltransferase) |
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| TIGRFAM ID | [TIGR00528] glycine cleavage system T protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTAATA AAACTGTACT CTTTAATAAG CACTTGGAAT CTGACGCCAA GATGGTCGAC
TTTCATGGTT GGGATATGCC TCTTAACTAT GGTTCACAGA TCGAAGAACA CAACGCCGTT
CGTCAAGATG CGGGTATGTT TGATGTGTCA CACATGACCG TTGTCGATGT GACCGGCACT
GACGCCTGTG CTTTCCTACG TAAATTATTA GCGAACGATG TCGCTAAGCT TAAGGTTCCC
GGTAAGGCGC TATACGGCGG CATGCTGGAC CATAACGCTG GTGTGATTGA CGACCTGATC
ACCTATTATC TTACCGATAC CCATTACCGC GTGGTGGTTA ACTCTGCCAC CCGTGAAAAA
GATTTAGCTT GGATCGCCGA GCAGGTAAAA GGCTTCGATG TTGAAATAGT CGAGCGTCCT
GAACTTGCCA TGATCGCCGT TCAAGGCCCC AATGCCAAGG CGAAAGCCGC TACGGTATTT
AACGATGCGC AAAATGCTGC CGTCGAAGGG ATGAAGCCAT TCTTCGGTGT ACAAGCCGAC
TCACTGTTTA TTGCGACTAC CGGTTACACC GGCGAAACGG GTTACGAAAT CATCGTGCCT
GAAGATGAAG CGCAAGCGCT ATGGCAAGGT CTTTTAGAAG CCGGTGTTAA GCCATGTGGA
CTAGGTGCCC GTGATACCCT GCGTCTCGAA GCTGGTATGA ACCTATACGG CCTGGATATG
GACGAAACGG TTAACCCGTT AGCGGCCAAC ATGGGCTGGA CTATTGCATG GGAGCCACAG
GACCGTGACT TTAACGGCCG TGAAGCACTG GCCGCAATTA AAGCTGCCGG TACCGAGAAG
CTGGTCGGTC TAATCATGGA AGCCAAAGGC GTTATCCGTC CGGGCATGTC GGTATTTTTC
ACCGACGGCG AAGGCGTAGA GCAGCAGGGC ACGATCACCA GTGGCACATT CTCGCCGACT
TTGGGCTATT CTATTGCGAT GGCCCGCGTG CCGAGAAGCA TAGGTGATAC TGCCGAAGTC
GAAATGCGTA AGAAGCGTGT CTCTGTTAAA GTAGTTGCCC CATCGTTTGT ACGCAACGGT
AAACAAGCCT TTTAA
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| Protein sequence | MANKTVLFNK HLESDAKMVD FHGWDMPLNY GSQIEEHNAV RQDAGMFDVS HMTVVDVTGT
DACAFLRKLL ANDVAKLKVP GKALYGGMLD HNAGVIDDLI TYYLTDTHYR VVVNSATREK
DLAWIAEQVK GFDVEIVERP ELAMIAVQGP NAKAKAATVF NDAQNAAVEG MKPFFGVQAD
SLFIATTGYT GETGYEIIVP EDEAQALWQG LLEAGVKPCG LGARDTLRLE AGMNLYGLDM
DETVNPLAAN MGWTIAWEPQ DRDFNGREAL AAIKAAGTEK LVGLIMEAKG VIRPGMSVFF
TDGEGVEQQG TITSGTFSPT LGYSIAMARV PRSIGDTAEV EMRKKRVSVK VVAPSFVRNG
KQAF
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