| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3667 |
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| Symbol | |
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| ID | 5613791 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 4468356 |
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| End bp | 4469846 |
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| Gene Length | 1491 bp |
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| Protein Length | 496 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640934620 |
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| Product | NADH dehydrogenase (quinone) |
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| Protein accession | YP_001475399 |
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| Protein GI | 157376799 |
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| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1009] NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCTAT CTTTGGAGCT GTTGCTACAG CTAACCATCA TCTTGCCACT GCTCGCCACC
TTGGCGATCT TGGCAACGGG AAAACATCCC AACCTTCGTG AGGCTGTAAC CATAAGCTTC
AGTCTTGCGG TGCTCTTTTG TGTGATAAAC CTATATCAAG GGCTCAGTGC CGGCGCATCT
ATCGAGGTGT TTTGGTGGCA GCTGCTGCCA GGCCTGGAAG TCAGCTTTGT TGTTGAGCCA
CTAGGGATGC TGTTCGCCCT CATTGCCAGC TTTCTCTGGC TCATCACCAC CCTCTATGCC
ATCGGCTATA TGCGTGGCCA CGGGGAGGAC AATCAAACTC GCTTCTATCT CTGCTTCGCA
TTAGCCATAA GCGCAGTGAT GGGGCTGGCA TTTTCGGCCA ACCTGTTCAC GCTATTTATC
TTCTACGAAG TGTTGACCCT CTCCACCTAT CCTTTAGTGA CCCACGCTGG CACTGAAAAG
GCCAAACAGG GAGGACGCGT ATATTTAGGT ATCTTACTCG GCACCTCTAT CGCCTTCTTC
CTACTGGCGA TTATCTTGAC CTGGTTTGTG GCCGGCACCC TGGACTTCAC CGTAGGCGGT
GTATTTGGCG ATAATGTCGA TACCAACTTG GTCGGCGCAA TACTGGTGCT GTTTGTATTT
GGTATTGGTA AAGCGGCCAT CATGCCGTTC CATCGCTGGC TACCCGCCGC TATGGTCGCG
CCAACACCGG TGAGCGCCCT GCTGCATGCC GTTGCCGTTG TTAAGGCTGG GGTATTCACC
ATATTAAAGG TCTGCGTGTT TATCTTTGGT ATCGAGCTGT TGCCAACCCT GCCGACGACC
GAGTTCCTGC TCTATCTAGC GGGCGCATCT GTGCTGCTCG CCTCGATAGT AGCCATGCGT
CAGGATAACT TAAAAGCGCG CCTTGCATAC TCTACAGTGA GCCAGCTGGG CTATATCACC
ATAGGTGCAC TGCTAGCCAC CTCATCTGGG GTTATCGGCA GCTCGATGCA CATTGCGACT
CATGCTTTTG GCAAGATCAC CCTGTTCTTC TGTGCAGGCG CCATTCTGGT GGCGACCCAT
AAATCGAAAG TCAGCGAAAT GCGCGGCCTT GGCTTTACTA TGCCAGTCAC CATGTTCGCA
TTTTTTATCG CTAGCCTGAG TATCATTGGC GTGCCACCAG CAGGCGGTAC TTGGAGTAAG
TGGTTCCTGT TGATGGGCAC CATGGAGACA GGTTATTGGG CCATTATGAT GGTGCTGATG
GTGAGCTCAC TGCTCAATAT CGCCTACCTG CTGCCTATCC CATACCACGC CTTCTTCCCT
GGCAAAGGGC ACCCAGCGGC AAAGACTGGC ATCAAGGAGG CACCGCTGGT GTCATTAATC
GCACTATCCA TCACCACCTT AGGTTGCCTT ATCTTGTTTA TCTATCCGCA ACCTCTCTAT
GAGTTGGCAA AAACCATCTT AACTGTACCT GGAGTTAGCC ATGGACATTA A
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| Protein sequence | MNLSLELLLQ LTIILPLLAT LAILATGKHP NLREAVTISF SLAVLFCVIN LYQGLSAGAS
IEVFWWQLLP GLEVSFVVEP LGMLFALIAS FLWLITTLYA IGYMRGHGED NQTRFYLCFA
LAISAVMGLA FSANLFTLFI FYEVLTLSTY PLVTHAGTEK AKQGGRVYLG ILLGTSIAFF
LLAIILTWFV AGTLDFTVGG VFGDNVDTNL VGAILVLFVF GIGKAAIMPF HRWLPAAMVA
PTPVSALLHA VAVVKAGVFT ILKVCVFIFG IELLPTLPTT EFLLYLAGAS VLLASIVAMR
QDNLKARLAY STVSQLGYIT IGALLATSSG VIGSSMHIAT HAFGKITLFF CAGAILVATH
KSKVSEMRGL GFTMPVTMFA FFIASLSIIG VPPAGGTWSK WFLLMGTMET GYWAIMMVLM
VSSLLNIAYL LPIPYHAFFP GKGHPAAKTG IKEAPLVSLI ALSITTLGCL ILFIYPQPLY
ELAKTILTVP GVSHGH
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