| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3657 |
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| Symbol | |
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| ID | 5612921 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 4457154 |
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| End bp | 4457591 |
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| Gene Length | 438 bp |
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| Protein Length | 145 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640934610 |
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| Product | CMP/dCMP deaminase, zinc-binding |
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| Protein accession | YP_001475389 |
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| Protein GI | 157376789 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG2131] Deoxycytidylate deaminase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATGACAA AATGGGCGAT ACGATTTTTA CAGATGGCCG AGCTAGTTGC ATCTTGGAGT
AAAGATCCCT CCACTCAAGT TGGGGCAGTG ATCACCGAAA ATAACCGCAT TGTCTCATTA
GGTTTCAACG GCTACCCCCA TGGGATCTCC GATAGTGCCG AAACCGACAA CCGGGAGATG
AAACTCCTGA AAACCCTCCA TGCAGAAGAG AACGCCATAC TCCATGCCAA ACGTGATCTG
AGTAGCTGTG AGATCTGGGT GACCCACTTC CCCTGCCCCA ACTGCGCTGC CAAGATAATC
CAAACTGGTT TACGCGCCGT ACATAGCCCG CAACCCAGCG AAGATTTTCT GTCGCGCTGG
GGAGATAAGA TTAAAGTCAG CCAGGATATG TTCGACCAAG CCGGCGTCCA GGTCGATTGG
ATGCAGGTAG AGTCGTAG
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| Protein sequence | MMTKWAIRFL QMAELVASWS KDPSTQVGAV ITENNRIVSL GFNGYPHGIS DSAETDNREM
KLLKTLHAEE NAILHAKRDL SSCEIWVTHF PCPNCAAKII QTGLRAVHSP QPSEDFLSRW
GDKIKVSQDM FDQAGVQVDW MQVES
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