| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3656 |
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| Symbol | |
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| ID | 5612920 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 4455768 |
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| End bp | 4456874 |
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| Gene Length | 1107 bp |
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| Protein Length | 368 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640934609 |
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| Product | tripeptidase T |
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| Protein accession | YP_001475388 |
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| Protein GI | 157376788 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2195] Di- and tripeptidases |
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| TIGRFAM ID | [TIGR01883] peptidase T-like protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAAATA TTAATCAACA AAGGCTGGTT GAACACTTTC TCTCGCTGGT GAAAATCGAC
AGCGAATCAG GCAATGAAAA AGCGGTTGCT GAAACCTTAG TAGAGCAACT CGGTCAACTG
GGCTTTGAGG TTACACAGCT TAGCGTTCCT GGCACCATTT CAAATGGCTT TAATATCTAC
GCCAAGCTAC AGGGCTCGCT TGAAGGTAGC ATCATTTTCA GCAGCCACAT GGATACTGTG
ACACCGGGTA ATGGTATTGA ACCCATCATT GAAGATGGTG TTATTAGCGC TAAAGGCGAC
ACCATTTTAG GGGGCGATGA CAAATCCGGT ATCGCTGCGG TCATGGAAGC GGTTCGTGCC
ATTCAAGAAA GTGGTGATGC ACATAAAACC ATTGAAGTTG CGTTTACCGT TTATGAAGAG
CGTGGCATGC ATGGCTCTAA GAACTTCGAT ATGAGCAAGA TTGAGTCTAA CCAAGCTATA
GTGCTTGATT CCGGTGGCCC GATTGGCACG ATTATCACTA CGGCTCCGGG TCAACAAAGC
CTGAAAGTTA CCATCAAAGG CAAGCCTGCG CACGCGGGAC TGGAACCTGA AGCAGGCATT
AATGCCCTGA CGGTCGCGGC TGACGCCATC AGCAAGATGC AGTTGAGTCG AATCGATGAG
GAAACCACCG CCAATATCGG TGTAGTGCAA GGTGGTCAGG CGACCAACAT CGTGATGCCA
GAGTTGCACA TCGAAGCGGA AGCCCGCTCA TTGAATGATG ATAAGCTGGC GAAGCAAGTG
GAACACATGG TATCGACCTT TGAATCGGCG GCACAAAAGC ATGGCGCAGG CATAGAGATT
GCCTCGAGTC GCTCTTACAA TGCGTACCAT ATCTCGGATG ATGATGCGCA CGTTACTGAG
ATTAAAGCCG CTTTTGAAGC CATAGGTATC GAAGCTGTCA CTAAGCCTAC CGGTGGAGGC
TCAGATGCCA ACATCTTTAA TGAAAAAGGC CTGAAGACGG TTAACTTGTC GACGGGGATG
TCGAAAGTGC ACACCACAGA TGAGTTTATC GCCGTCGCCG ATCTGGTATC AATCACAGAG
TTTATCCGTT CATACCTGAC GCGCTGA
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| Protein sequence | MTNINQQRLV EHFLSLVKID SESGNEKAVA ETLVEQLGQL GFEVTQLSVP GTISNGFNIY
AKLQGSLEGS IIFSSHMDTV TPGNGIEPII EDGVISAKGD TILGGDDKSG IAAVMEAVRA
IQESGDAHKT IEVAFTVYEE RGMHGSKNFD MSKIESNQAI VLDSGGPIGT IITTAPGQQS
LKVTIKGKPA HAGLEPEAGI NALTVAADAI SKMQLSRIDE ETTANIGVVQ GGQATNIVMP
ELHIEAEARS LNDDKLAKQV EHMVSTFESA AQKHGAGIEI ASSRSYNAYH ISDDDAHVTE
IKAAFEAIGI EAVTKPTGGG SDANIFNEKG LKTVNLSTGM SKVHTTDEFI AVADLVSITE
FIRSYLTR
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