| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3654 |
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| Symbol | |
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| ID | 5612790 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 4454310 |
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| End bp | 4455041 |
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| Gene Length | 732 bp |
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| Protein Length | 243 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640934607 |
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| Product | uridine phosphorylase |
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| Protein accession | YP_001475386 |
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| Protein GI | 157376786 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG2820] Uridine phosphorylase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAAAC AACCCCATAT CGCGGTGAGT CCGCAACAGG TGGCCGAGCA TGTCATCGTG
TGTGGTGAGC CGGATCGTGT TAATCGCATC TCAGCCCTGC TGGAGCAAGT TGAGCTGTTA
GCCGATAACC GTGAGTTTCG CCTGATGAAT GGCCTGTACC AGGGCAAATT GATCACGGTG
TGCAGCACGG GTGTGGGTGC GCCATCGGCC ATCATCGCCC TGGAAGAGCT GAATCTGTGT
GGTGCCAAAT ATGTGGTACG GGTCGGCTCG GCCGGTGCGC TGCAGCACGA TATAGCCCTG
GGCGAACTGA TTGTTGCCGA GGCTGCGGTA CGTGATGAGG GAGGCTCTAA AGCTTATGTG
GCCAGTGAGT TCCCGGCCTG CGCCAACCGC CATCTGCTCT TTGGGATAGA GGCGTATCTG
GTTGAAAATA ACTACCCGGC TCACGTGGGT CTGGTTCGCT CCCATGATAG TTTTTACCGC
GATGATGAGG ATAGTATCTG TCAGCTCTGG AGCCAAAAAG GCGTACTTGG CGCAGACATG
GAAACGTCCG CCCTGTTAAC CGTGGGCAGA CTGCGCGGGC TGAAAGTGGC TTCAATACTC
AATAACGTTG TTCTGTACCA GCAGGATGTT CAGGATGGGG TCAACCAATA CGTTAATGCC
GATAATGTGA TGATGCAGGG GGAACTGGTC GCATCCAGAG CCGCGTTGCA CGCCCTGTGG
TTACAGCCGT AA
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| Protein sequence | MSKQPHIAVS PQQVAEHVIV CGEPDRVNRI SALLEQVELL ADNREFRLMN GLYQGKLITV
CSTGVGAPSA IIALEELNLC GAKYVVRVGS AGALQHDIAL GELIVAEAAV RDEGGSKAYV
ASEFPACANR HLLFGIEAYL VENNYPAHVG LVRSHDSFYR DDEDSICQLW SQKGVLGADM
ETSALLTVGR LRGLKVASIL NNVVLYQQDV QDGVNQYVNA DNVMMQGELV ASRAALHALW
LQP
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