| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3649 |
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| Symbol | |
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| ID | 5612925 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 4446255 |
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| End bp | 4447106 |
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| Gene Length | 852 bp |
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| Protein Length | 283 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640934602 |
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| Product | hypothetical protein |
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| Protein accession | YP_001475381 |
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| Protein GI | 157376781 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1639] Predicted signal transduction protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAACTT CACCTCTTGA TTACGCCAAG CAAGCGCAAA AAATATGTGT GCTATCCGAT
GTTTATATTA CATTGAACCG AATGCTATCC AGTGATGATT GCAGCATGGA GGAGTTGGCC
GATGCCATTG CCTATGAGCC TGCTATTGCC GCATCTATTT TAAAAATCGC CAATAGTGCC
ATGTTCAGCA TGCCAAGAGA GATAGACAAC CTCTCTAAAG CATTAGTCCT GCTTGGTATT
AAGGAGGTAA AAAAACTGGT GAATGCCTAT GGTGTCACCG CGGCATTTTC CAGCATAGAT
CCTAAAGTCG TGGATGTGGA TAAATTCTGG GAGATAAGTG TAGATTGTGC CTTGATTTGC
CAGTATTTCG CCAAAAATAA GGACACTCCC GATACTGACA ACATCTTCTT GTCCGGGCTA
TTTCATAACT TGGGGATGCT GGCCATTGTC CATAGCGAGC CTGATAAAGT CAGATATTGT
GAGGGCTATG ACCGCGATGA AACCCCTTGG CTTCGCCAGA GCGAGGTGTT TGGTTTCACC
TTTGCTGATT GCACTACCGA GTTGTTAAAG CTGTGGAACT TGCCGGACAC CATCATACAG
CCCATTTCCC AGTTTAATCG CGCAGAGGGT GAACCATTGC CTGATAATAG CAAATTGCTA
TATATTGCTT CGCGTTTAGC CGTGATTAAC GCCGAACCCG GGCTATATGC CAAGGAGGAG
TTAATCAATC CGGATATTTT GGAAGATCTG GGTATCAGCT TAGATGAAAT AAACGAATCG
CTTGAGTATT GTAACTTGCA AGGGATACAG CTTTTAGCGA CGTTTCCGAT ACAAGGCAGA
ACGAGAGAAT AA
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| Protein sequence | MSTSPLDYAK QAQKICVLSD VYITLNRMLS SDDCSMEELA DAIAYEPAIA ASILKIANSA
MFSMPREIDN LSKALVLLGI KEVKKLVNAY GVTAAFSSID PKVVDVDKFW EISVDCALIC
QYFAKNKDTP DTDNIFLSGL FHNLGMLAIV HSEPDKVRYC EGYDRDETPW LRQSEVFGFT
FADCTTELLK LWNLPDTIIQ PISQFNRAEG EPLPDNSKLL YIASRLAVIN AEPGLYAKEE
LINPDILEDL GISLDEINES LEYCNLQGIQ LLATFPIQGR TRE
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