| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3646 |
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| Symbol | |
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| ID | 5612767 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 4441836 |
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| End bp | 4443080 |
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| Gene Length | 1245 bp |
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| Protein Length | 414 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640934599 |
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| Product | hypothetical protein |
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| Protein accession | YP_001475378 |
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| Protein GI | 157376778 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0628456 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGCGATG CGCCAGCTAC GGCCACGGGA GCAGAGGTAT TCAATGGCTT CAAGGGGAAA
CGCAAACTGT GGGAATTAAC CAGCAAGCTG CTATGTCCGG TCATAGGTAC CTGCCTGACC
ACCTCTGAGA TCCGTAAGTT GGCCCAGAAG GTTGTCGACA AAGAGCAGGC CCGAAAAAGC
GATTACTGGC TGCATACCTG GGTGGTCTCC AACTGCGATA GCAAACACCA TTTGTCTTTG
ACAGTACAAA AGCATCTGGA TAAAAAGTTT GCCGCCGCCA TCAAGCGTTT TGGTCTGCTC
AAGTGTCGCG ATGAACTCAA GCAACTCTGG CAGCAACATA TTGACCGAGG GGCCAGCGCC
GAAGCCCTAT GGGCACTGTT AACGCATCCC TTGTGTGATC TGGCCATGCA GGATATGGCC
TACGAAACCA TTCATATGTT GTCGCATCAG ATTGGAGCCG GCCAGCGTGC AGACCTTAAA
CGTTTGCACG AGGCTGAAAA GGAGCTGGTC GAACTGAGAA AAGCATTGGA TAAAAGCCAG
CAGAAAGCCC ATCAGACCAT CTCCAACAAA GAATGTCAGC TGGACACTCT GCAGCGGCAG
GTGGCTGAAC TCAAGGCGGA CAATCTGCGC CTCAAAGAGC ACAACCAACG CCTTGAGCTG
GGAGGTGACA GCAGCGCACT GGCGCCGCAA CTGCAGCAGT TGCGCAACGA ACTGGCCAGC
ACAAGCAGCT CGGTCGAGAT CCTGGACAGA CAAAAGGTAC AGTGGCAGCA AAAACTTAGG
CAGAGTGAAG AAAATATTCT GGATCTGACT CAGAAACTGC GGCAGCGGGA GCAGGAGACC
CGGGCACTGG AAGGGTTCGT GAAGCAGAGT CTATCTCCCT GTAATGGCTG CAGCGCCGAC
AGCTGTCGCG ATTGTCCGGA TCTCAAGGGG CAGAAAATTC TTTGTGTTGG CGGCATGCAC
CGTATGACTG ACCAATACCG GGAGCTGGTG TCTCGCTGCA ACGGCGAATT CAGCCACCAC
GACGGCGGCG TCGAAGACCG CAGCAAACGC CTGGATGCCC TGCTATGGTC AGCCGATGCG
GTTATCTGTG CCTCCGACTG TATCAGTCAC GATGCCTACT ACCGCCTGAA GCGCTTCTGC
AAGCAGCACA ATAAGCGTCA TCTGTTCATC CCCTCATCCG GCATATCGAG TTTTGCTAAG
GCTATGGACG ACGTGGCCAA TGGAGTCAGC TGCATCAGCC TATAA
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| Protein sequence | MCDAPATATG AEVFNGFKGK RKLWELTSKL LCPVIGTCLT TSEIRKLAQK VVDKEQARKS
DYWLHTWVVS NCDSKHHLSL TVQKHLDKKF AAAIKRFGLL KCRDELKQLW QQHIDRGASA
EALWALLTHP LCDLAMQDMA YETIHMLSHQ IGAGQRADLK RLHEAEKELV ELRKALDKSQ
QKAHQTISNK ECQLDTLQRQ VAELKADNLR LKEHNQRLEL GGDSSALAPQ LQQLRNELAS
TSSSVEILDR QKVQWQQKLR QSEENILDLT QKLRQREQET RALEGFVKQS LSPCNGCSAD
SCRDCPDLKG QKILCVGGMH RMTDQYRELV SRCNGEFSHH DGGVEDRSKR LDALLWSADA
VICASDCISH DAYYRLKRFC KQHNKRHLFI PSSGISSFAK AMDDVANGVS CISL
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