| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3643 |
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| Symbol | |
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| ID | 5612746 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 4438099 |
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| End bp | 4438680 |
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| Gene Length | 582 bp |
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| Protein Length | 193 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640934596 |
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| Product | TetR family transcriptional regulator |
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| Protein accession | YP_001475375 |
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| Protein GI | 157376775 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0256948 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTAATG CCGAATTTGA TAGAGAAAAA GTACTGAGAT CTGCCATGAC CGCCTTTATG
GACAAAGGTT ACGGCAAGAC GAGTATGCAA GATCTCACTA AAGCCACGGG TTTACACCCT
GGATCTATCT ACTGTGCATT CGATAATAAA CGGGGTCTTT TATTGGCGGC CTTAGAGCAA
TATAAAGCCG ATAGAAGTGC AGAGTTTCAG CGTTTCTTCT CTGGAAACAA GCCTGTATTA
GTCGAGCTAA AAGCCTATCT GGATAATACC GTTCAGGAGT GCATCAGCTG CGAAGCGGCT
AAGGCCTGCC TGCTCACTAA AGCGCTCAAT GAGATGGCTC AGCAGGATGA AGAGGTGCAA
GAAATCATTA TGGCGAACCT GGCAAACTGG CAACAGGGAC TCGCCGATGT TTTTGAGCTG
GCCCAAGCTA AAGGCGAGCT CAGCGCTAAA CGTGATAGCC AACATCTGGC GCGTTTTTTA
GCCATGGGAA TTTACGGTTT AAGAACCTTT GCACACACGC ACCCTCAGGG CGAAACCCTG
CAAGAGTTAG CGGACCAACT CTTCCAGGAT ATCTGTGCTT AG
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| Protein sequence | MRNAEFDREK VLRSAMTAFM DKGYGKTSMQ DLTKATGLHP GSIYCAFDNK RGLLLAALEQ
YKADRSAEFQ RFFSGNKPVL VELKAYLDNT VQECISCEAA KACLLTKALN EMAQQDEEVQ
EIIMANLANW QQGLADVFEL AQAKGELSAK RDSQHLARFL AMGIYGLRTF AHTHPQGETL
QELADQLFQD ICA
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