| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3642 |
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| Symbol | |
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| ID | 5612745 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 4437392 |
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| End bp | 4438018 |
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| Gene Length | 627 bp |
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| Protein Length | 208 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640934595 |
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| Product | hypothetical protein |
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| Protein accession | YP_001475374 |
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| Protein GI | 157376774 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.00607831 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATGACAA GACAGATAAA AATAGTGGTA ACCGGTGGGC CTGGTGGTGG CAAGACCACG
GCGCTCGACC TATTCCGCCG CGAACTTGGC GATACCGTTG CCATCGTCCC GGAGTCGGCG
ACCGTGCTCT TTTCCGGTGG CATAGGTAGA TCCTGTGATG AACAGGTCGT TAAGAATGTT
CAAAAAACCA TATTCTCTCT TCAGCAGAAC GTAGAAAACA TCCAAGAGAA ACAGTACCCC
GATAGATTCC TTATCTGTGA CAGAGGCACA CTAGATGGTC TGGCCTACTG GCCCGGTACG
GAAGATGAAT TTTTTGAGGA GGTAGGCTCT ACCATTGAAA AAGAGCTCAG TCGTTACGAC
GCCGTCATCT TCTTCGAATC TGCCGCAGCA AGCGGGCGAG ATATTCAGAG CAATAACCCC
ATCAGAAACG AGTCTTCGAC TCAGGCCGCA GCGCTGGATA AAAAACTCCA GAGTATCTGG
TCACGGCACC CCTCTTACTA CTTCGTTGGC AATTCAGAGT CCTTCGTAAA GAAGATTATG
TTTGGCATAA TGACCATCGA AAACGTGATC AACAGACACA ACGGCGGGTA TGTGGGACCA
AGCTTTGTGC CCAACTTGTC TAAGTGA
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| Protein sequence | MMTRQIKIVV TGGPGGGKTT ALDLFRRELG DTVAIVPESA TVLFSGGIGR SCDEQVVKNV
QKTIFSLQQN VENIQEKQYP DRFLICDRGT LDGLAYWPGT EDEFFEEVGS TIEKELSRYD
AVIFFESAAA SGRDIQSNNP IRNESSTQAA ALDKKLQSIW SRHPSYYFVG NSESFVKKIM
FGIMTIENVI NRHNGGYVGP SFVPNLSK
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