| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3636 |
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| Symbol | |
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| ID | 5612646 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 4427180 |
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| End bp | 4429477 |
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| Gene Length | 2298 bp |
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| Protein Length | 765 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640934589 |
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| Product | molybdopterin oxidoreductase |
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| Protein accession | YP_001475368 |
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| Protein GI | 157376768 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0000159575 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGTGAGC AGCAAGTGCC AAGTTATTGC GCTCAATGTA TTTCGCGTTG TGGCTGTCTG
GTTACGGTGA AAGATGGGGT GCTAACTAAG GTACAGAATC TTGCGGGTCA TCCGACCGGA
GATGTTGTCT GTGTTAAGGG GAAAGCGGCG CCGCAGATAG TTTATCATCC CGACCGTTTA
CTCATGCCTA TGCAGCGCAC TCAGCCCAAG GGGAGCGATA ATCCCGGTTG GCAACCTATC
TCGTGGCAGC AAGCGCTTGG CACTATCGCC GATAAACTCG GCCAATTCAG ATCACAAAGT
GGTGCCAAAT CTGTTTGTTG GGGCATAACG ACACCGAGCG CCACGGCCAT TGCAGATAGC
TTTATCTGGA TTAATCGTCT GGCTCATGCG TTTGGATCTC CCAATAAGCT GTTTGCTACT
GAAAACTGTA ATTGGCACAA AGACTTTTCT CATGCTTATG TATTCGGTCA AGGCATAGGC
ATGCCTGACT ATAAAAATAC CGACTGTATC TTGTTGTGGG GTTTTAATCC GAAAGAAACC
TGGCCGGCTC ATGCTCTGCA AGTGACTGAG GCGCAAAAAC GCGGGGCGAA ACTGATCGTT
ATCGATCCCA GAAAAGCGGG GCTGGCCGAA AAATCTGACT TGTGGATGGG CATCACTCCG
GGAACCGATG GGGCGTTGGC TATGGCGTTA GCGAACTTGT TAATCGCTAA TAAGCAATAT
GACCAAAGCT TTGTTCGTCG TTGGAGTAAC GGCCCACTCT TAGTGCGCGA TGATAACGGC
AGCCTGCTGA CCGCTGAAGA TCTGGGACAG TGTGGTGCTA ATGACCCTGA GCAACTCGTT
GCCTGGGACG AGCGAGCGCA AGCCATTGTG CTTTATGATG TTAAGTCATG TGAATACCAG
AGCGACTCGA TAGAAGATCC CCTGTTTGCC CTGGACGACA GGATAGAACT TAATGGGATT
TCATGTCGGC CCGCTTTTTC TCATTATAGA GATGCATGTC AGCGCTACAC CCTTGAGTAT
GCCCAATCTG TAACCGGTAT TTCGGCTGAG CAAATTGAGC AGATGGCCTC GATGATCGGC
GAGTCCAAGG CGGTGAGTTA TTTCTCTTGG ACGGGGACCG CCCAGCATCA ACAGGCTACA
CAGACTACAT TAGCGATAGC GAGCCTATAT GGACTCACCG GGTGCCTGGA TAAGCGAGGG
GGAAATGTCT ACTTCTCTAA GCCGCCTGTT AATAATCTTA TGGGGTTTTC ACTACTGAGC
AGTGAGCTGC GAAAAGAGGC GCTGGGGGCT GACAAGCCTC TGGGCCCCTG GAAGATGGGC
TGGGTTAACT CAAACGATCT GCATAGAAGT GTGATACATA AAGCGCCCTA TAAAACCCGT
GCCCTCATCG CCTTTGGCGG CAACCCGATA GCGACTAAAC CCAATGAAGC TTTCGTGCGT
GAGACTCTGC GGGAGTTGGA GTTCTATGTC CATGCGGATC TATTTATGAA TGAGTCGGCC
AAAGAGGCCG ATATCGTGCT GCCCGTATCC AGCTCGTGGG AACGCTCGGG ACTCACCCCA
GGCTTTCTGG TTTCACAACA GGCTGAATCC CTGTTGCAGC TGCGTAAACC TGTTATCGAA
CCTCTGGGCG AGGCTAAGTC GGATACCAGT ATTGTGTTTG AACTCGCCGG ACAACTGGGG
TTGGGGGAGC ACTTTTGGGA AGGAGAAATC GATGCTGCCC TCGAGGAGGT ATTGGCGCCT
ACCGGAGTTA GCTTATCAGA GCTTAAGGCA CAACCGGCCG GCATAGACTT AGGGCTTAAG
ACCCATTACC GGAAATATCG AAATCAGGGA TTTAATACAC ACTCCGGCAA GCTGGAGCTC
TATTCAGAGT GTCTGCTTAA GTCAGGATAT TCACCTGTTC CTCAGTTCCC TGAAATTCAG
GCCCCCTCTG ACTACCCGCT TATCCTTACC TCTGCAAAAT TCAGGGCACA TTGTCATAGC
CAACATAAGA ATATCGGGAT GCTGAATCGT CGTGCCGATG CTCCGCTTGT CGAGATAAGC
AGGGCACTGG CTCAAGAGTT GTCAATTAGC GCCAATCAGA CAATCATTAT TGAGACCCCC
ATCGGCCGAA TGACAGCGAT TGCCAGGCTC AATGCCGACT TAGCGAAAAA TGTGCTGTGT
GCTCAGTATG GCTGGCAGGA AAGTGGCAAA AACTATAATG GCATCATAGA GCAGACTCAA
TCGGATCCCA TCAGTGGCTC GAATCGATTG AAGAGTCAGT GGTGCAGAAT CCGCAAACTT
GAGACTCAGC CTGGCTGA
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| Protein sequence | MSEQQVPSYC AQCISRCGCL VTVKDGVLTK VQNLAGHPTG DVVCVKGKAA PQIVYHPDRL
LMPMQRTQPK GSDNPGWQPI SWQQALGTIA DKLGQFRSQS GAKSVCWGIT TPSATAIADS
FIWINRLAHA FGSPNKLFAT ENCNWHKDFS HAYVFGQGIG MPDYKNTDCI LLWGFNPKET
WPAHALQVTE AQKRGAKLIV IDPRKAGLAE KSDLWMGITP GTDGALAMAL ANLLIANKQY
DQSFVRRWSN GPLLVRDDNG SLLTAEDLGQ CGANDPEQLV AWDERAQAIV LYDVKSCEYQ
SDSIEDPLFA LDDRIELNGI SCRPAFSHYR DACQRYTLEY AQSVTGISAE QIEQMASMIG
ESKAVSYFSW TGTAQHQQAT QTTLAIASLY GLTGCLDKRG GNVYFSKPPV NNLMGFSLLS
SELRKEALGA DKPLGPWKMG WVNSNDLHRS VIHKAPYKTR ALIAFGGNPI ATKPNEAFVR
ETLRELEFYV HADLFMNESA KEADIVLPVS SSWERSGLTP GFLVSQQAES LLQLRKPVIE
PLGEAKSDTS IVFELAGQLG LGEHFWEGEI DAALEEVLAP TGVSLSELKA QPAGIDLGLK
THYRKYRNQG FNTHSGKLEL YSECLLKSGY SPVPQFPEIQ APSDYPLILT SAKFRAHCHS
QHKNIGMLNR RADAPLVEIS RALAQELSIS ANQTIIIETP IGRMTAIARL NADLAKNVLC
AQYGWQESGK NYNGIIEQTQ SDPISGSNRL KSQWCRIRKL ETQPG
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