| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3634 |
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| Symbol | |
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| ID | 5612096 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 4425102 |
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| End bp | 4426388 |
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| Gene Length | 1287 bp |
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| Protein Length | 428 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640934587 |
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| Product | long-chain fatty acid transport protein |
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| Protein accession | YP_001475366 |
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| Protein GI | 157376766 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2067] Long-chain fatty acid transport protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000535062 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00000860939 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGAAAGA TGAGTCGATT GAACAAAACA ATCATTATTG GCACAACGAT ATTGTTACCA
CAACTGGCAT ACAGTGCTGG CTTTCAGCTT AATGCGCAAT CGAATGCTGG CTTGGGACGC
GCTTTTGCCG GGGATGCGGT CATTGCTGAT AACGCCTCCT CTATGGCACG TAATCCCGCC
ACCATGGCAC TGTTTAAAGA GGCCGCATTG TCGGCAGGAT TTATCAGTAT CACCTCTATG
GTCGAAGTCA AAGATGCGGT TTATACCCGC GATTTATATA GCCAGGGGGC ACTCGTCGAT
AGCTCGTCTC AATCCGCAAA TTATGATGAT GCCGGTGACA ACGCCATTGC CCCCAATATC
CACTTTATTA TGCCGATTAA TGACAAGTTC GCCTGGGGCA TTAACGCGTA TTCAAACTTC
GGTACTAAAA CTGAATATAG TGAGGATTAT ATCGCCGGCG AGTATGGTGG TATGAGTGAA
GTGAAGAGCT ACAACCTGGG GCTATCGGGC TCCTATCGCA TGAGTGAGCA TTTCAGCATA
GGTGCAGGGC TGGATATCAT CGCCAGTACA GGCAAGCTCA AGAGGAGCCT GCAACCTACA
GACACTAACC TGTTGACTGT CGATGCCAAA GGCTGGGGAC TGGGGTTTAA TCTGGGCGCC
GTGTATGAAC TCGATGATAA CAATCGCTTC GGTTTGTCCT ATCGTTACAG CCCTGAAATG
GAGACTGAAG GGGATGTCGA CTACGCGGGG TATTTGGGCG AGTCCGGCCC TATCGACGAT
ACGGTAGTGA TCCCTTTGCC GAGCATGGCT GAATTTTCCG GTTTTCATCA CCTCGAAAAT
AGCAATATCG CGCTGCATTA CAGTATTCAA TGGATAGGTT GGAGCGTGTT TGAAAATCTC
GATGCCGAGA CCAGTGGTAC ACTTAATCGT TATGAGTGGC AAGATGGTTG GCACTACGCT
ATCGGTGCGA CTTACTACCT GAACAGTGCC TGGACCCTTA GGGCGGGCTA CCTGTACGAT
ACCAGCGCGC AGGATAAGCT GACCTCGATT TCGGTACCTG ATTCGAACAG GCAGTTTTTC
TCAACCGGTT TCACTTACCA ATTAACGCCA AACTCTGACT TAGATTTTGG TTTTACCTAT
GTATTAGGCG AAGATGTGAG TGTGGTTGAG TCGAAGCCTA TGATCCCGAT AGATATCGCC
AGCGGCACCT ATTTGGCCAC CAATCTTACG GCGACGAGTC ATGCCAACGC CATGATGGTC
GGATTGCAAT ACAACCGGAC TTTTTAG
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| Protein sequence | MRKMSRLNKT IIIGTTILLP QLAYSAGFQL NAQSNAGLGR AFAGDAVIAD NASSMARNPA
TMALFKEAAL SAGFISITSM VEVKDAVYTR DLYSQGALVD SSSQSANYDD AGDNAIAPNI
HFIMPINDKF AWGINAYSNF GTKTEYSEDY IAGEYGGMSE VKSYNLGLSG SYRMSEHFSI
GAGLDIIAST GKLKRSLQPT DTNLLTVDAK GWGLGFNLGA VYELDDNNRF GLSYRYSPEM
ETEGDVDYAG YLGESGPIDD TVVIPLPSMA EFSGFHHLEN SNIALHYSIQ WIGWSVFENL
DAETSGTLNR YEWQDGWHYA IGATYYLNSA WTLRAGYLYD TSAQDKLTSI SVPDSNRQFF
STGFTYQLTP NSDLDFGFTY VLGEDVSVVE SKPMIPIDIA SGTYLATNLT ATSHANAMMV
GLQYNRTF
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