Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_3618 |
Symbol | |
ID | 5611828 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | - |
Start bp | 4405091 |
End bp | 4406179 |
Gene Length | 1089 bp |
Protein Length | 362 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640934571 |
Product | hypothetical protein |
Protein accession | YP_001475350 |
Protein GI | 157376750 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTACTT CTGTAACAAA CGGGTCTCTA ATTGGGCTCG TTCTCGCCAC TCTCTTAATC TCTTTGCCAT CCCACGCTGT TGAAGAATTT GACTACCAGA GCTTTTCTGA CTCATTTTCG ATAATAGATA CCGTCGCCGG AAGGGGGAAG CATGGTGAGA AGTATCATAA CGGTTGGCAG ACAGGCTTTG AAAACCACTC GGCTAAAAAG GCTGAACTGT CGAGACCACA TCAGGCGATA GCGGATTCAG ATGGCAATAT ATTTATTGCC GATAAAGATG CGCATGCGAT CAGAAAAATA GATCTCAATG GGATGATTTC AACCTATGTC GGAACCAATG AGTCTGGTTT CAACGGTGAC AGTTTGAAAA GAACCCTGAC CCAACTTTCA TTTCCTAATG GTATCTGGCT AACGGCCAGT GAAGCGCTTT TTATATTAGA TTCCGGCAAC GATATGATCA GAAGGGTGGA GCATGATGGG ACTGTGACCA CCTTGTTTAA GGATGAGGAG GGAATTGAAA CCGGCCGTGG GCTATGGGTT AGTGACGATG AGTCTGTGGT CTATTACTCT TCAGGTTCTG AGTTAAAACA GTGGCGCAGG GGTAGGGGGA TTCGTGTTCT CGCTGATGGG TTCGATGAGC TGGCTAACCT TGCGGTGAAT GCTAAAGGAG AGCTCTTTGT CACCGACCGG GATGCGAATC TGGTTTATAA AGTCTCGGCG AATGGAGATA AAGAGATCGT TGCAGGCACG GGTAAACGCT CGGGGTGTGG CGATGGCTGC CTGGCAACTG ACACCGCATT GAATCAGGTC CGGGGGATTT GGTTTCACCC TAATGGAGGT TACTTCTTAG CGACACATAA GGGGGGACAA ATCTGGTTTG TCGATCCGGA TGGAGTCATA CACCTATTTG TCGATGGCGG TAAAAACGAT CAGCACTTCG GTGATCGTCG AACCTACAAT ACGCCCGGTA AGAAAATCAG CGAACCCAGA GCCATCTCAA TGGATAGTAA GGGCAATCTG CTGATAACTG AGAGTGATTA CGGCTATATC AGAATTGTTA AGCACATTGA TAAAGCCGAG GTTAAGTGA
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Protein sequence | MTTSVTNGSL IGLVLATLLI SLPSHAVEEF DYQSFSDSFS IIDTVAGRGK HGEKYHNGWQ TGFENHSAKK AELSRPHQAI ADSDGNIFIA DKDAHAIRKI DLNGMISTYV GTNESGFNGD SLKRTLTQLS FPNGIWLTAS EALFILDSGN DMIRRVEHDG TVTTLFKDEE GIETGRGLWV SDDESVVYYS SGSELKQWRR GRGIRVLADG FDELANLAVN AKGELFVTDR DANLVYKVSA NGDKEIVAGT GKRSGCGDGC LATDTALNQV RGIWFHPNGG YFLATHKGGQ IWFVDPDGVI HLFVDGGKND QHFGDRRTYN TPGKKISEPR AISMDSKGNL LITESDYGYI RIVKHIDKAE VK
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