| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3612 |
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| Symbol | |
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| ID | 5611574 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 4399291 |
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| End bp | 4400001 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640934565 |
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| Product | purine nucleoside phosphorylase |
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| Protein accession | YP_001475344 |
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| Protein GI | 157376744 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0813] Purine-nucleoside phosphorylase |
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| TIGRFAM ID | [TIGR00107] purine-nucleoside phosphorylase, family 1 (deoD) |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGACTC CCCACATTAA TGCTCAACCC GGTGACTTTG CCCCAACCAT ACTAATGCCG
GGCGATCCTC TGCGAGCCAG ATATATTGCC GATAAGTACC TGGAAAATGC CAAACAGGTC
TGTGATGTTC GTGGCATGTT AGGTTTCACC GGGACGTACA AGGGCTGCAG GATTTCGGTT
ATGGGCCACG GTATGGGGAT CCCCTCATGT TGCATCTATG TCCATGAGTT AATTAGCGAG
TTTGATGTGA AGAATGTCAT TCGTATCGGT AGCTGCGGTG CCGTGCGTGA CGATGTGAAT
ATGATGGATG TGGTGATCGC CATGGGGGCG TCTACCGATT CAAAGACCAA CCGGATGAGA
TTCAGTGACC ATGATTTTGC CGCCATTGCC GACTATCATC TGCTTGAGAC GGCTGTGAAC
AAGGCCCGCG AGCAGAATGT GTCGGTGCGT GTGGGTAATA TTTTCTCGGC AGATCTCTTC
TATACGCCTC AGCCCGAACT GTTCGCCAAG ATGGAGGATA TGGGAATTAT GGCGGTGGAT
ATGGAAGCGG CGGGGATCTA CGGTGTGGCC GCCGAATTGG ATGCCAGGGC ATTGACCATA
CTCACGGTCT CTGATCATAT TAAGCGTGGC GAGAAACTCA GCTCCGAAGA CAGGCAGAAG
TCTTTCAACG AAATGATGAG TGTCGCCTTA GAGACAGCAA TCAGCATTTA G
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| Protein sequence | MPTPHINAQP GDFAPTILMP GDPLRARYIA DKYLENAKQV CDVRGMLGFT GTYKGCRISV
MGHGMGIPSC CIYVHELISE FDVKNVIRIG SCGAVRDDVN MMDVVIAMGA STDSKTNRMR
FSDHDFAAIA DYHLLETAVN KAREQNVSVR VGNIFSADLF YTPQPELFAK MEDMGIMAVD
MEAAGIYGVA AELDARALTI LTVSDHIKRG EKLSSEDRQK SFNEMMSVAL ETAISI
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