| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3608 |
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| Symbol | |
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| ID | 5610127 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 4395820 |
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| End bp | 4396842 |
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| Gene Length | 1023 bp |
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| Protein Length | 340 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640934561 |
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| Product | oxidoreductase domain-containing protein |
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| Protein accession | YP_001475340 |
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| Protein GI | 157376740 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0673] Predicted dehydrogenases and related proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAGA CATTGAATTG GGGAATCCTT GGGACAAGCT TTATTTCTGG AGTGATGGCT
GATGCCATTG TTGAAGAGGG TCATACCCGC TTACATAGTG TGGCTGGACG TTCTGAAAAA
ACCTTGATGG AATTCGCTGA AAAGTACGAT ATCGCAAACA TCTATCAGGA TTATGATGCC
CTGATTAACG ATGATGAGGT CGACATCATC TACATCGCAT TACCTAACCA TCTTCATCAT
GACTTTGTGA TAAAAGCCGC CAACGCCGGC AAGGCCATTT TGTGTGAGAA GTCATTGTCT
ATCGATATGA AGAAGACGGA TGAGGCGCTT GCAGCAGTTG CAAATAATCA GGTTTTCTTT
GCTGAGGGAT TGATGTATCT CACACACCCG TTTGCCAGCA AAATAAACGA AATTATTCGA
CTCGGCACCA TTGGCGAAAT CCGTTCCATC AATGGAGTGT ATTGCGCCTC TATCGCCCAA
TTCGTAAATC CGGATAGTAA GGGGGCCTTG TATAACTTAG GTTGTTACCC TGCTTCTCTT
ATGCACTTCG TTATGCAGCA AGCGTTCGGC GACGGTATCT TCGATAACTA TCGTATCGCG
GCATCGGGCC GTGTTGGCGA AGATGGTAAT ATATGCGAGT CGGCCGCAAA CATACAATTC
AGTAATGGTG TTAGCTGTCA GCTTCATACG GCAGAAGATT ATGGCTTGCA TGCCGATTTT
ACAATACTTG GCAGTAAAGG AAGCTTAGCG CTTGTGTCTA ATCCCTGGTT ACCGGAGGCT
GAAGGTAATC GCTTAGTTGT TACTGAGTAT GAACAGCAAG GTGAAGCTGT CTCTGTGTCC
GCTGAGGGTA ACGGTTTCCT CTATCAGGTT AGATTAATCA GAGAGGCGAT AGAGCAGAGA
AGCGCTTCAC TGCAACGCCC CGCTGCAACC CCGGAAGATT CACGTCAAAT AATGAAGATA
CTGACGGATT GGGAAGCTGC CACTAAAGTT CATAAACTTG AAGAGTTAAA TAACCGCTGC
TAA
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| Protein sequence | MKKTLNWGIL GTSFISGVMA DAIVEEGHTR LHSVAGRSEK TLMEFAEKYD IANIYQDYDA
LINDDEVDII YIALPNHLHH DFVIKAANAG KAILCEKSLS IDMKKTDEAL AAVANNQVFF
AEGLMYLTHP FASKINEIIR LGTIGEIRSI NGVYCASIAQ FVNPDSKGAL YNLGCYPASL
MHFVMQQAFG DGIFDNYRIA ASGRVGEDGN ICESAANIQF SNGVSCQLHT AEDYGLHADF
TILGSKGSLA LVSNPWLPEA EGNRLVVTEY EQQGEAVSVS AEGNGFLYQV RLIREAIEQR
SASLQRPAAT PEDSRQIMKI LTDWEAATKV HKLEELNNRC
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