| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3606 |
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| Symbol | |
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| ID | 5610125 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 4394225 |
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| End bp | 4395091 |
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| Gene Length | 867 bp |
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| Protein Length | 288 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640934559 |
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| Product | hypothetical protein |
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| Protein accession | YP_001475338 |
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| Protein GI | 157376738 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4922] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGAAGA AAAGTATTTC TGCGGCATTG GCCACGACGG TTCTGGTATG CGCGGCGTGC
TCCAGTCCGG TTTCAGTTGA GGAGAAGACC ATTAGCCTAT CTAACAAAGG CAAGGCCGTG
GCCCTGCTCA ACAGCATAGA AACCGGTGAC AGAGGAGCCG TGGCTTATGT CAATCCAGAC
AAGTACACCC AACATAACCT GGCTGTTGCC GATGGCTTAG CGGGTTTTGG GGCACTGCTC
CAGGCACTTC CGAAAGGTAG CGCCAAGGTA GATATTAAAC GCGCCTTTCA GGATGGCGAC
TATGTATTTA CCCATACCGA CTATAATTTC TTTGGACCTA AGGTGGGATT CGACCTATTC
CGTTTCGAAG ACGGGTTAAT CGTAGAGCAT TGGGACAACC TGGCAGAAAA AGCCGCACCG
AATCCAAGCG GTCGCACTCA GATCGACGGT CCGACGACTG TGATCGATTC AGATAAAACA
GAGCAAAATA AAGCATTAGT TGCAGACTTC GTCGACACGA TTTTGGTAAA TGGAGACTTT
GCTCAGCTTG GACGTTTTAT CGATAAGGGT GATGCAAACT ATCTTCAACA CAATACCGGC
ATTGCCGATG GGCTAAATGG TCTTGGTAAG GCACTGGAAG AGATGGCTAA ACAGGGCATC
AAGATGGTCT ATACGAAAAA TCATATCGTG TTGGGTGAGG GAAACTTCGT ACTCAGCATT
AGTGAGGGTA GCTTCGGTGG CGAACACGTC TCTTTCTACG ACCTGTTCCG TGTTGAAAAT
GACAAGCTCG TCGAGCACTG GGACATCATA GAACCGATCC CAACCAAAGA CAGATGGAAG
AACAATAACG GCAAATTTGG GTTTTAA
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| Protein sequence | MMKKSISAAL ATTVLVCAAC SSPVSVEEKT ISLSNKGKAV ALLNSIETGD RGAVAYVNPD
KYTQHNLAVA DGLAGFGALL QALPKGSAKV DIKRAFQDGD YVFTHTDYNF FGPKVGFDLF
RFEDGLIVEH WDNLAEKAAP NPSGRTQIDG PTTVIDSDKT EQNKALVADF VDTILVNGDF
AQLGRFIDKG DANYLQHNTG IADGLNGLGK ALEEMAKQGI KMVYTKNHIV LGEGNFVLSI
SEGSFGGEHV SFYDLFRVEN DKLVEHWDII EPIPTKDRWK NNNGKFGF
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