| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3605 |
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| Symbol | |
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| ID | 5610124 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 4393268 |
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| End bp | 4394143 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640934558 |
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| Product | hypothetical protein |
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| Protein accession | YP_001475337 |
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| Protein GI | 157376737 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGATCC CAGAAGTTAG CTTTAACCAT AGGAAAACGG ACAACCGCGA AATTGAGGTC
ATCGACTTAG AGGAGCTCTA TGAGCGGGAG CATAACTACT CTCATCACCC CGGAGTGCCT
CACAGAATAC ACTTCAACAA TTTGATCTAC ATCGAAGAGG GTGAAGGTAC CCACCTGATC
GATTTTGTTA ATTACCCCTA CCAGTCCGGT GCATTTATCT TCGTTCAAAA AAATCAGGTT
CATGCGTTCG ATTTTAAGAA TAAGCCGAAA GGGAAACTAC TGATATTCAC CCAGGCATTC
ATTAATCAGG CATTGATGAA TATGAGGCTA TCAGATTTCA CACCGACACA TTTAGCTTAC
TCTTATCAGC CTGTTTTCTT CCCCGACCCG GAGGTCATGA GCAGTAGTGA AAAAATACTG
AGTGAAATCA ATAAAGAGCT GGTTCACCCT CAATCAAACC CGTTAATAGT CATGTTCCTC
TTCTCTTCAC TATCCTTGAT GTTGCACCGG GTGATGCCTG AAAACCAACA TGACAGATTA
AACAAAGAGC AGCAGACTAA GTTCACTCGC TTTGTCGAGT TACTCGAACA AAACTTCCAA
CGCACACGAG ATGCTATCTA CTACGCAGAT ATGCTACATA CAACTTATAA GACCCTGAAT
CAGATCTGCA AGATGGCCAC CAGCCAGACA GCGAAACAGC TCATCGACGC CCATACTATA
TTGGAAGCCA AAAGACGCTT GATTCTGGAT GGTTTGCCCA CTCAACAGCT TGCCTATGAG
TTCGGCTTCG AAGACGCCAG TAATTTCGTG AAGTACTTCA AGAAACATAC CCTGCTCACC
CCTTCTCGCT TTCAGAAACA GTTTAAAAGT TCGTAA
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| Protein sequence | MKIPEVSFNH RKTDNREIEV IDLEELYERE HNYSHHPGVP HRIHFNNLIY IEEGEGTHLI
DFVNYPYQSG AFIFVQKNQV HAFDFKNKPK GKLLIFTQAF INQALMNMRL SDFTPTHLAY
SYQPVFFPDP EVMSSSEKIL SEINKELVHP QSNPLIVMFL FSSLSLMLHR VMPENQHDRL
NKEQQTKFTR FVELLEQNFQ RTRDAIYYAD MLHTTYKTLN QICKMATSQT AKQLIDAHTI
LEAKRRLILD GLPTQQLAYE FGFEDASNFV KYFKKHTLLT PSRFQKQFKS S
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