Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_3598 |
Symbol | |
ID | 5610990 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | - |
Start bp | 4386752 |
End bp | 4387060 |
Gene Length | 309 bp |
Protein Length | 102 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 640934551 |
Product | ArsR family transcriptional regulator |
Protein accession | YP_001475330 |
Protein GI | 157376730 |
COG category | [K] Transcription |
COG ID | [COG0640] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 51 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATATTG AAGTGGTTGC GAAGGCGTTG AAGGAGTTGG GTCATACGAC TCGATTAACC ATCTATAAGC GAGTGGTCCG CGCGGGTTTT CAGGGCCTTG CAGTAGGCAG CTTGCAAGAG CAGCTCAAGA TCCCTGGCTC AACCTTGTCA CACCATATCT CGAGTCTGGT TTCTGCCGGA CTCATCTCTC AGCGTCGTGA GGGGAGAACC CTCTATTGTG TTGCCGAGTT CGATAAGCTC GAGGGCGTGA TTGGCTTCCT GCAGGATGAG TGTTGCATCG ATGAGCAGTG CTGCACGCAA GAGGAGTAA
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Protein sequence | MDIEVVAKAL KELGHTTRLT IYKRVVRAGF QGLAVGSLQE QLKIPGSTLS HHISSLVSAG LISQRREGRT LYCVAEFDKL EGVIGFLQDE CCIDEQCCTQ EE
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