Gene Ssed_3598 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsed_3598 
Symbol 
ID5610990 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sediminis HAW-EB3 
KingdomBacteria 
Replicon accessionNC_009831 
Strand
Start bp4386752 
End bp4387060 
Gene Length309 bp 
Protein Length102 aa 
Translation table11 
GC content53% 
IMG OID640934551 
ProductArsR family transcriptional regulator 
Protein accessionYP_001475330 
Protein GI157376730 
COG category[K] Transcription 
COG ID[COG0640] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATATTG AAGTGGTTGC GAAGGCGTTG AAGGAGTTGG GTCATACGAC TCGATTAACC 
ATCTATAAGC GAGTGGTCCG CGCGGGTTTT CAGGGCCTTG CAGTAGGCAG CTTGCAAGAG
CAGCTCAAGA TCCCTGGCTC AACCTTGTCA CACCATATCT CGAGTCTGGT TTCTGCCGGA
CTCATCTCTC AGCGTCGTGA GGGGAGAACC CTCTATTGTG TTGCCGAGTT CGATAAGCTC
GAGGGCGTGA TTGGCTTCCT GCAGGATGAG TGTTGCATCG ATGAGCAGTG CTGCACGCAA
GAGGAGTAA
 
Protein sequence
MDIEVVAKAL KELGHTTRLT IYKRVVRAGF QGLAVGSLQE QLKIPGSTLS HHISSLVSAG 
LISQRREGRT LYCVAEFDKL EGVIGFLQDE CCIDEQCCTQ EE