| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3596 |
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| Symbol | |
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| ID | 5613428 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 4383882 |
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| End bp | 4385003 |
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| Gene Length | 1122 bp |
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| Protein Length | 373 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640934549 |
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| Product | hypothetical protein |
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| Protein accession | YP_001475328 |
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| Protein GI | 157376728 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0701] Predicted permeases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTCCTG AAATTTTAAC CATGGCCCGT GAGGCCGCCG ATATGTTTGC CTTCCTGGCA
ACCGAATTGA TCATCCTCTT TCTTGTCATC AGCTACTTTG TCGGTGTACT GCAGGAGTTT
ATAACCCCGG AAAAAATTCA ATCTATTTTG AGTTCCCGCA ACGGCAAAGG TTATGTAATA
GCGGCGTTGC TGGGGGCAAT CACACCATTT TGCTCCTGCT CGACTATCCC GTTCCTTAAA
GGCTTGCTCA GAGCAAGGGC GGGTTTTGGC CCCATGATGG TGTTTTTGTT CTCCAGCCCC
TTGCTCAATC CGGTGATCAT CGGTTTGTTT GTGGTGACCT TCGGCATTAA GGTGGCGCTG
TTCTACTTCA CCATAGCCCT GGTCGTGGCT GTTACGGCCG GTTTTGTCCT GGAAAAACTG
GGCTTCGAGC GTTACGTTCG CCCCGAGGCG TATGAAGCTG CCGATGCATC AAGTTGCGGA
GCGACATGTG GTGATACTAA TACAGCAGCT GAAACTAGCA GTGAGTCAGG TTGTTGCGAC
AGTCAGGCAA AGTCTGATGC TCAAGTTGTG ACAAGCTGCG GCGCTGCACC TGCTCCAGCA
TTAGTAATGG AAGCGAGTGG CTGTGGAGCA ACCACAGCAC CAGCAGTGGC AGTTTCCTCT
TGTGGCACTG GCTCATCATG TGGAACTGCA GACGCTAAGG CGGGAAGTAC TGAGAGCAGA
TGGCTGCGGA TCTGGCGCTC AACCTGGAAA GATTTTAAGC AGGTATTTCC ATACTTGCTG
TTAGGTATCA CCTTAGGTTC GTTTATCTAT GGTTTTATCC CCACAGAATT GATTGCTAAG
TATGCGGGTG AGGGGATGTG GTACGCGATC CCTGTGGCAG CGATTATCGG TATTCCACTC
TATATCCGAG CCGAAGCGGT GATCCCACTG AGTGCAGCCT TAGTGCAGAA GGGGATGGCG
TTAGGTTCTG TGATGGCCTT GATTATCGGT AGCGCAGGAG CGAGTCTGAC CGAAGTGATT
CTGCTTAAAT CTATCTTTAA GAATCAGATG ATCGCCGCTT TTCTTACTGT GATCTTGGGT
ATGGCTATCG GCGCAGGTTA TCTCTACAGC TATATGTTCT AG
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| Protein sequence | MSPEILTMAR EAADMFAFLA TELIILFLVI SYFVGVLQEF ITPEKIQSIL SSRNGKGYVI
AALLGAITPF CSCSTIPFLK GLLRARAGFG PMMVFLFSSP LLNPVIIGLF VVTFGIKVAL
FYFTIALVVA VTAGFVLEKL GFERYVRPEA YEAADASSCG ATCGDTNTAA ETSSESGCCD
SQAKSDAQVV TSCGAAPAPA LVMEASGCGA TTAPAVAVSS CGTGSSCGTA DAKAGSTESR
WLRIWRSTWK DFKQVFPYLL LGITLGSFIY GFIPTELIAK YAGEGMWYAI PVAAIIGIPL
YIRAEAVIPL SAALVQKGMA LGSVMALIIG SAGASLTEVI LLKSIFKNQM IAAFLTVILG
MAIGAGYLYS YMF
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