| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3593 |
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| Symbol | |
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| ID | 5613850 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 4380467 |
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| End bp | 4381267 |
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| Gene Length | 801 bp |
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| Protein Length | 266 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640934546 |
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| Product | hypothetical protein |
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| Protein accession | YP_001475325 |
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| Protein GI | 157376725 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTTAAAAC ATCGAGAATA TAGACGTCAT GGCCCTGATT ATCGCTTCGG TGAGCAGATG
ACCTTTCATG ATATTAAAGA AACCTTTGGC CTGAATCATA TTCGACTCGG TAGTTGGGTC
GAGGAGGATG AGAAGAATAA GGCTGCCAAC TTGATCTTCG ACTCTCTGGC CGATCTGGCG
TTTATTCTTA AACTGCCTCC TAAAGCCCTT GGGCTGAGAC AGACTCTCAA CCTGGCTTTT
GGTAGCGGTG GACAACAGGG CGTGCAGGCT CATTATATGC CTGTAGGCCG AGAGCTTGCG
CTGGCAAAGA ACGCGGGAGC AGGTGCTCTG GCTCACGAGT TTTGGCACGC CTTCGATCAC
TATATTGCGC CTAAAGCGTT CAGCACCTCA ACTCGTGGGG TCTCCTTTGC CAGCAGTAGC
TGGCTGGCGG ATGTGAGTGC TATTCAACAC CCATTGAACC GGCGTTTAGA GCAGCTATTT
GCGACAACTA TGCTCAGCGA TGATGGTAAT GACTGCCATG ACTTTGTCAG TCGGGCCGTT
GCATTAGATA AGCAGTATGG ACGGCAATAT TTTTCTAAAC CTACCGAGCT GATGGCCCGC
GCCTTTGAGG CATGCATCGA ATCACAGCCT GAGATAAGTA ATCCCTATCT CGTCGCCGAG
ACCTTGAGTT CGTCACTGGC CGATTCCGGT GGTTATCCGG ACTTAGCGCA TCGTCAGCAA
ATCTTCACGG CGCTGATCGC ATATTTTGAA CCCCTGGGCG AAGCCTTAGG ACGAGAAGGG
GAAAAGAAGA AAAGGGGATA A
|
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| Protein sequence | MLKHREYRRH GPDYRFGEQM TFHDIKETFG LNHIRLGSWV EEDEKNKAAN LIFDSLADLA
FILKLPPKAL GLRQTLNLAF GSGGQQGVQA HYMPVGRELA LAKNAGAGAL AHEFWHAFDH
YIAPKAFSTS TRGVSFASSS WLADVSAIQH PLNRRLEQLF ATTMLSDDGN DCHDFVSRAV
ALDKQYGRQY FSKPTELMAR AFEACIESQP EISNPYLVAE TLSSSLADSG GYPDLAHRQQ
IFTALIAYFE PLGEALGREG EKKKRG
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