| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3592 |
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| Symbol | |
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| ID | 5613849 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 4379862 |
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| End bp | 4380401 |
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| Gene Length | 540 bp |
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| Protein Length | 179 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640934545 |
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| Product | thioredoxin peroxidase |
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| Protein accession | YP_001475324 |
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| Protein GI | 157376724 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1225] Peroxiredoxin |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.845386 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGTTT CAGTAAAGTT ATCGGCAGGT TCAAACTTCC CTTCGATAAG GGCCAATACA
CTCGATGGCA ATACGATCAC ATTAGGGCGA GCTTATCATG AGGCTATATG GCAATTGGTG
GTGATCTACC GTGGGCAACA TTGTCCTCTA TGCACAAAAT ACCTAAACCA GTTAGAAGGC
TATAAAACAC GTTTACAAAA AATTGGCCTT GATATTGTTG CCATCTCGGC CGACTCCAAG
GCTCAGCTTG AGGCACATAA AGAGAGACTA ACGACTAGCT TCCCAATCGC TTACGGCCTG
ACTCAGGAGC AGATGCAACA ACTCGGGCTA TATATCTCTA TTCCTCGCTC CGAACAGGAA
ACCGATCATG ACTTTGCCGA ACCCGGACTC TTCGTGGTTA ATCGAGTAGG AGTCATTCAG
GTCATCGATA TCTCCAATAA CCCCTTCTGT CGCCCGGAGC TAGAAGCCTT AGTCTCGGGT
TTGGAGTGGA TAAGCGATCC GGATAACGAT TACCCGATCC GCGGCACACT TGCCTATTAA
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| Protein sequence | MSVSVKLSAG SNFPSIRANT LDGNTITLGR AYHEAIWQLV VIYRGQHCPL CTKYLNQLEG
YKTRLQKIGL DIVAISADSK AQLEAHKERL TTSFPIAYGL TQEQMQQLGL YISIPRSEQE
TDHDFAEPGL FVVNRVGVIQ VIDISNNPFC RPELEALVSG LEWISDPDND YPIRGTLAY
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