| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3586 |
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| Symbol | |
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| ID | 5613521 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 4371012 |
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| End bp | 4372601 |
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| Gene Length | 1590 bp |
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| Protein Length | 529 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640934539 |
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| Product | ABC transporter ATP-binding protein |
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| Protein accession | YP_001475318 |
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| Protein GI | 157376718 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3845] ABC-type uncharacterized transport systems, ATPase components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.931394 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTACAC TCCCTAGCGA CAAACCTTTT GCACTCGAAC TGCGTGGCAT CGATAAGCGA
TTCGGTGCAG TGCATGCTAA TCGAAATATT GATCTACAAG TTCCTCCCGG CACCATTCAT
GGCATTATCG GTGAAAACGG GGCGGGTAAA TCGACCCTGA TGAACATCAT CTATGGGTTT
TATACCGCAG ACGCCGGAGA TATTCTGATT GGCGGTGAGG TTCAGAAGCT TGCCAACTCG
AAAGAGGCCA TCAGTCACGG TATCGGCATG GTTCACCAGC ACTTCATGTT GGTTGATAAC
TTCACCGTTC TTGAAAATGT GATTTTAGGT GCCGAAAATG GTCCTCTGCT CAAGCACAGC
CTCCATGATG CCCGCACAGA GTTAGAGCGG TTAGCAAAAG ATTACCAGCT CGAGGTGCCA
CTCGATGCCT TAATTGAAGA CTTGCCGGTA GGCCTGCAGC AGAGGGTTGA GATATTAAAA
GCCCTGTACC GTGGCGCCAA GATCCTCATT CTTGATGAGC CTACGGGCGT ACTGACTCCC
CAGGAAACTG ATCACCTGTT TCATATTTTC GATGCGCTGC GTGAGCAGGG CGTCACAATT
TTACTGATCA CCCACAAACT CAGAGAGATC CTGGCCGCCA CAGATAACGT TTCGATCATG
CGCCAAGGGG CGATGGTCGC GCACAGAAAA ACGGCAGAGA CGAATAAGGA AGAGCTGGCC
GAGCTTATGG TGGGACGAAA GGTACGCCTG AAAGTCGATA AAAATGCGGC TAAACCTGCT
CAGGTTGTAC TGTCCACCCA AGATCTGACC TACACAGATG AGATGGGTGT CGATCGTCTC
AAAAAGGTCA ACATGGATAT TAAGGCCGGT GAGGTTGTCG GTGTTGCCGG AGTATCCGGT
AATGGCCAGT CTCAGTTGAT TAACGCCCTT GCAGGCCTGC TCACACCGAC CAGCGGTTCA
ATCACCATCG GCGACACGCG TATCTCTGCC GAGCACCCCA GCTCGCCGGA CGGCGTTCGC
CAACTCAGTG TGGGCCACGT GCCGGAAGAC AGACTGGACA TGGGGCTGAT TAAAGCCTTC
AGCGCCGAAG AATCAGCCAT CTTAGGGCAT CAGAATCACT CTGATTATAA TGGTCTGGTG
ATGAATAAGC CTAAGGCGAT TACACAAGAG TGTGTACGTC TTATGGAGGA GTGGGACGTA
AGGCCGCAAG ATCCTAAGCT AAGAAGTTCA CTATTTTCCG GTGGTAACCA GCAGAAGCTG
ATCATTGCAC GAGAGGTTGA AAAAAATCCG GATGTACTGC TGATCGGTCA GCCGACCCGA
GGTGTGGACA TCGGCGCCAT CGAATTTATT CATAAACGTA TCATCGAACT GAGAGATCAG
GGGCAGGGTA TCTTGCTTGT ATCGGTGGAG CTCGATGAGA TCATGGCCCT GTCCGATAGG
ATCATCGTGA TGTTCGATGG CAATATCGTG GGTGAAGTGA GCGCCGAGCA GGCGAACGAG
AAAATTCTTG GAATGATGAT GGCCAACATA CTACCCGATG AGCTTAGCGA GTCGGATGCA
GGACAAACGA CTAACGGAGG TCAATCGTGA
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| Protein sequence | MSTLPSDKPF ALELRGIDKR FGAVHANRNI DLQVPPGTIH GIIGENGAGK STLMNIIYGF
YTADAGDILI GGEVQKLANS KEAISHGIGM VHQHFMLVDN FTVLENVILG AENGPLLKHS
LHDARTELER LAKDYQLEVP LDALIEDLPV GLQQRVEILK ALYRGAKILI LDEPTGVLTP
QETDHLFHIF DALREQGVTI LLITHKLREI LAATDNVSIM RQGAMVAHRK TAETNKEELA
ELMVGRKVRL KVDKNAAKPA QVVLSTQDLT YTDEMGVDRL KKVNMDIKAG EVVGVAGVSG
NGQSQLINAL AGLLTPTSGS ITIGDTRISA EHPSSPDGVR QLSVGHVPED RLDMGLIKAF
SAEESAILGH QNHSDYNGLV MNKPKAITQE CVRLMEEWDV RPQDPKLRSS LFSGGNQQKL
IIAREVEKNP DVLLIGQPTR GVDIGAIEFI HKRIIELRDQ GQGILLVSVE LDEIMALSDR
IIVMFDGNIV GEVSAEQANE KILGMMMANI LPDELSESDA GQTTNGGQS
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