| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3563 |
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| Symbol | |
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| ID | 5611552 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 4343473 |
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| End bp | 4343973 |
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| Gene Length | 501 bp |
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| Protein Length | 166 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640934516 |
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| Product | hypothetical protein |
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| Protein accession | YP_001475295 |
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| Protein GI | 157376695 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR03146] cytochrome c nitrite reductase, pentaheme subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCAGAT TATCCCGCTA TTGGCCACTA TCTCCAGCAA TTGAGTTGCC ATCAATCCTG
TTGCCATCAA TCATCTGCTT AATCATGGCG GGAATACCTA GTCCTGTCGA TGCACAACCA
AATGAGTCTC TGACCATAAA TCAAAATTCC TGCATGAAGT GCCATAAACG CAACGGAGCC
ATGTTTGGAC TACATGCTAA TGCTGCACTT GCAATTGAAT GTCAGTCTTG TCATGGAGAG
CGAGGCAAAC ACCCCAAGAA GGGGTCGAGC ATTCGACGTT TTTCAAGCGA CAACTCGACG
TCTGTGGCTG AACAAACGGG AGCCTGCCTC GAGTGTCATG ATCATGAAAT CATCGCTATG
GCTGATTGGA CCCATAATGT TCATGCCGAT AAGGTAAATT GTGCCAGTTG TCACCAGTTG
CATGTGGAAT ACGATCCTAT GCTGCAGATC ACGGTGAAAG AGCGCAGCCA GCTGTGCCGC
GGGTGTCACC TCGTTAAATA A
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| Protein sequence | MSRLSRYWPL SPAIELPSIL LPSIICLIMA GIPSPVDAQP NESLTINQNS CMKCHKRNGA
MFGLHANAAL AIECQSCHGE RGKHPKKGSS IRRFSSDNST SVAEQTGACL ECHDHEIIAM
ADWTHNVHAD KVNCASCHQL HVEYDPMLQI TVKERSQLCR GCHLVK
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