| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3544 |
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| Symbol | |
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| ID | 5611926 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 4319313 |
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| End bp | 4319912 |
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| Gene Length | 600 bp |
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| Protein Length | 199 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640934497 |
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| Product | hypothetical protein |
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| Protein accession | YP_001475276 |
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| Protein GI | 157376676 |
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| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0526] Thiol-disulfide isomerase and thioredoxins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAAGAG ATGTTTCACT GTTTTCGGGT TTGAATTTTT TGGTGATCAG GGCTCTGGCT
TTGGTAGTGG CTTCGGCGTT TGCTTTGAGT GTCGGCGGGT CGGTCAGCGC CGAGCCGTTA
AAAGTGGGTG AGATAGCGCC AAACTTCACA ATCAATCAAA TCGATAACAC TCCTTTCAAA
CTTAGCGAGT TTAAGGGGAA GCAATCAGTC TATCTGATCT TTTGGAATAC CTGGTGTGGC
CACTGTATGA AGAAGGTGCC TCAGTTGATG ACTATTGAGC GTGAGTTCGG TGAGCAGGTT
AAGTTACTTG CGATCAATAC CAGCTGGAGT GATTCTTTAG CCGAGATATC TCAATTTCAG
GCCAGATTCG AGGCTAATTA CGCCATCGCC TTCGATGATA ATGCCGAAAT CACCCATAGA
TACGGGGTTA TGGGCACACC TACCGGTTTC CTTGTCGATA TCAATGGGGT AATAAGACAG
GTCGATGGGA TAACCCATAC GTTGGCGGCC AACATTGAAC AGTGGAATCG AGTGTCAGGC
ACTGAAGGGA AGCCCGTGGT GCTGGCGGGG GCAGTGTGCG ACAAGGACAG CTTATGTTAA
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| Protein sequence | MRRDVSLFSG LNFLVIRALA LVVASAFALS VGGSVSAEPL KVGEIAPNFT INQIDNTPFK
LSEFKGKQSV YLIFWNTWCG HCMKKVPQLM TIEREFGEQV KLLAINTSWS DSLAEISQFQ
ARFEANYAIA FDDNAEITHR YGVMGTPTGF LVDINGVIRQ VDGITHTLAA NIEQWNRVSG
TEGKPVVLAG AVCDKDSLC
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