Gene Ssed_3537 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsed_3537 
Symbol 
ID5611982 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sediminis HAW-EB3 
KingdomBacteria 
Replicon accessionNC_009831 
Strand
Start bp4310297 
End bp4310716 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content50% 
IMG OID640934490 
ProductMaoC domain-containing protein 
Protein accessionYP_001475269 
Protein GI157376669 
COG category[I] Lipid transport and metabolism 
COG ID[COG2030] Acyl dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTATA CAATTAACCA GCTTACTATC GGCCAGAGTG CGTCATTTGA GAAGACCATA 
AGCGAATCTG ACATACTGCA ATTTTGCGGG ATCAGCGGAG ACATAAATCC AGTTCATGTG
AGTGAGTTAG CAGGCCAGAA AAGCGTCTTT GGTCGGAGGG TTGCACATGG CATTTTAGTC
TCCGGCCTGA CCTCGGCAGT ACTGGGCATG AAGTTACCCG GCCCCGGAAC CATCTACCTG
GGTCAGGATA TGCGTTTTAT CGCACCAGTC TATATCGGTG ACACCATTCG CGCAGAGGTC
GAAGTCGCCG AGATAATCAA AGACAAGAAC ATAGTCAAGC TCAAGACCCG CAGCATCAAC
CAGCACAACA AGGTGGTTAT CGAAGGCATG GCCACTGTAA TGCCCCCCAA GGCAGATTAA
 
Protein sequence
MNYTINQLTI GQSASFEKTI SESDILQFCG ISGDINPVHV SELAGQKSVF GRRVAHGILV 
SGLTSAVLGM KLPGPGTIYL GQDMRFIAPV YIGDTIRAEV EVAEIIKDKN IVKLKTRSIN
QHNKVVIEGM ATVMPPKAD