Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_3537 |
Symbol | |
ID | 5611982 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | + |
Start bp | 4310297 |
End bp | 4310716 |
Gene Length | 420 bp |
Protein Length | 139 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640934490 |
Product | MaoC domain-containing protein |
Protein accession | YP_001475269 |
Protein GI | 157376669 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2030] Acyl dehydratase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 50 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATTATA CAATTAACCA GCTTACTATC GGCCAGAGTG CGTCATTTGA GAAGACCATA AGCGAATCTG ACATACTGCA ATTTTGCGGG ATCAGCGGAG ACATAAATCC AGTTCATGTG AGTGAGTTAG CAGGCCAGAA AAGCGTCTTT GGTCGGAGGG TTGCACATGG CATTTTAGTC TCCGGCCTGA CCTCGGCAGT ACTGGGCATG AAGTTACCCG GCCCCGGAAC CATCTACCTG GGTCAGGATA TGCGTTTTAT CGCACCAGTC TATATCGGTG ACACCATTCG CGCAGAGGTC GAAGTCGCCG AGATAATCAA AGACAAGAAC ATAGTCAAGC TCAAGACCCG CAGCATCAAC CAGCACAACA AGGTGGTTAT CGAAGGCATG GCCACTGTAA TGCCCCCCAA GGCAGATTAA
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Protein sequence | MNYTINQLTI GQSASFEKTI SESDILQFCG ISGDINPVHV SELAGQKSVF GRRVAHGILV SGLTSAVLGM KLPGPGTIYL GQDMRFIAPV YIGDTIRAEV EVAEIIKDKN IVKLKTRSIN QHNKVVIEGM ATVMPPKAD
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