| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3536 |
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| Symbol | |
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| ID | 5611981 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 4308586 |
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| End bp | 4310175 |
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| Gene Length | 1590 bp |
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| Protein Length | 529 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640934489 |
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| Product | acetate/3-ketoacid CoA transferase |
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| Protein accession | YP_001475268 |
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| Protein GI | 157376668 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG4670] Acyl CoA:acetate/3-ketoacid CoA transferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGTTG ATGTACTCAC AGCTAAACAA GCTGCATCCC TTATCAAGGA TGGAGATAAG
GTGATTTTAG GCGGATTCAT AGGTGCGGTC GTCCCTGAAG CGATAGAGCA AGCCGTCGGT
GAACAATTCC TTTCAACCGG GCACCCTAAT AATTTAGAGA TCTACTTCAC CGCCGGTCAG
GGGGATGGTA AAGACAAGGC CACCAATCAC CTTTCACATC CCGGCATGGT CAGTATGGCA
CTGGGAGGAC ATTGGGGGCT CATTCCACGA CTCCAGAAAT TGGCAAATGA CGAGCAGATA
CAAGGTTATA ACTTTCCTCA GGGAGTGATA GCACAATTAC TCAGAGATTC GGCAGCCGGT
AAACCCGGCA CACTCTCACA TGTCGGCCTC GGCACCTTTA TCGACCCAAG GCTCGGTGGT
GGGAAAATTA ACGCCATCAC TAAACAAGAG CGCGTATCAC TAATGACCAT AGATGATAAC
GAGTATCTGT TCTATAAACG ACTCGATGCC AATGTAGCAC TGCTAAGAGG CACAACGGCA
GATGAGAACG GCAATATCAC CATGGAAGAT GAGTGTCTGT TTTTAGAAAA TCTGGCAGCA
GCACAGCTTG TCACCAATAT GGGCGGCACA GTCATTGTAC AAGTCAAAAG AGTCGTCAAA
GCTGGAACCT TAGCCCCACA ACAGGTCCGC ATTCCCGGGA TTTTTGTCAA TGCGGTAGTC
GTGGCTGACG GTGAATCCCA TATGCAGACA TTCGCAGAGC AGATGAACCC CGCCTACTGC
GGACGCGGAG ACGGGCAAAT AGGCAAACCG CAGCCACGTC AACTGGATGC TAAAAAGATC
ATTGCCCGCC GCGCGGCAAT GGAGCTCAAG CAGGGTGCTA TCTTAAATTA CGGCATCGGT
GCCCCCGAAG TGATTGCCAA TGTCACAGAT GAGGAGGGGA TCACTGATCA AGTCATTGCA
ACGGTCGAGC CTGGAGCCAT TGGTGGAACC CCGGCCGGAG GGCTCAGCTT TGGAGCATCG
GCTTTCCCTG AGTCTGTGAT AACCCAAGAT CAAATGTTTG ATTTTTACGA TGGTGGCGGA
ATCGATCAGG CTTTTTTAGG GCTGGCAGAG TGTGACATAA ATGGAGACCT GAACGTTTCA
AAATTCGGCC CAAAAATTGC TGGCTGCGGC GGGTTTATCA ATATCACCCA GAATGCCAAG
CAAGTATTTT TTTGCGGCAC ATTCACCGCA GGAAAGCTAC AGATTGAAAC GGGTGACGGA
GAGTTACGAA TCGTCAATGA GGGCCAGATT AAAAAACTGA TTAATCGGGT TGGTCAGATC
ACATTCGCGG CCGATATCGC CAGAAAAAAC AATAAACCTG TTCTGTATAT CACCGAGCGC
GCCGTATTTA AGTTGGTCAC CGAGGGGCTC GAGTTGATTG AAATTGCCCC GGGGGTGGAT
CTCAAGCATG ACATATTAGA TCAGATGGAG TTCACCCCCA AGATCGGCGC AGATCTAAAA
ATCATGGATA AGCGGATCTT TACCGACCAA CCCATGGGGC TCACCCTTGA CTCAAAGGAT
GACGACTTAA CCGTATTCAA CGCCGCCTAA
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| Protein sequence | MKVDVLTAKQ AASLIKDGDK VILGGFIGAV VPEAIEQAVG EQFLSTGHPN NLEIYFTAGQ
GDGKDKATNH LSHPGMVSMA LGGHWGLIPR LQKLANDEQI QGYNFPQGVI AQLLRDSAAG
KPGTLSHVGL GTFIDPRLGG GKINAITKQE RVSLMTIDDN EYLFYKRLDA NVALLRGTTA
DENGNITMED ECLFLENLAA AQLVTNMGGT VIVQVKRVVK AGTLAPQQVR IPGIFVNAVV
VADGESHMQT FAEQMNPAYC GRGDGQIGKP QPRQLDAKKI IARRAAMELK QGAILNYGIG
APEVIANVTD EEGITDQVIA TVEPGAIGGT PAGGLSFGAS AFPESVITQD QMFDFYDGGG
IDQAFLGLAE CDINGDLNVS KFGPKIAGCG GFINITQNAK QVFFCGTFTA GKLQIETGDG
ELRIVNEGQI KKLINRVGQI TFAADIARKN NKPVLYITER AVFKLVTEGL ELIEIAPGVD
LKHDILDQME FTPKIGADLK IMDKRIFTDQ PMGLTLDSKD DDLTVFNAA
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