| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3530 |
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| Symbol | |
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| ID | 5612099 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 4300229 |
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| End bp | 4301335 |
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| Gene Length | 1107 bp |
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| Protein Length | 368 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640934483 |
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| Product | hypothetical protein |
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| Protein accession | YP_001475262 |
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| Protein GI | 157376662 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1075] Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTAAAG GTTTAAAAAT GCATTTATGG ATATTACCTG TACTATTAAT ATCTTCTTCG
GCTCATTCGG TAGAGTGCAA TAATCATAAT GGATTTATCT GTTCTGATTC TAATTATCAA
TTTTCAGATA ACTTCATAAA CCAAGACAAA TATCCTGATG GTGGATTTGG AGGGGGAAGC
TGCCAGGCAA ACAAAACACC GGTTATCTTT CTTCATGGTA ATGGAGACAA TGCCATCGGC
TGGGCACTCC CACCGAGTGT CAGCCCAGAA AGCTATCCAC AAGCTCCCTT TTCTGTCTAT
GAGTCCTTCA AACAGGCTGG CTACAATGAC TGTGAGTTAT TCGGGTTAAC TTACCTCTCT
ACTAAACAAC GACAATCCCC ACAGCTTAAT TACCATGATG CGAGCACACA GGAAACTATT
CATCAATTTA TCGATAATGT ATTGGCATAT ACCGGCCAGA CAAAGGTTAA CATTGTCGCT
CACTCTCTCG GCGTCTCAAT GGCGCTCTCC AGCTTATACA AACATCAGGC CTGGGATAAA
ATCGACCGAT TTATTAATAT CGCCGGTGCC ATTCGTGGAC TGCAGTCATG TTTATATACC
GGATACGCTA ATGCATTAGC ACCAACCTGT GGCAGTCAGA ACCTTTATGA CGCTAACACC
TTTGGGCTAT ATCCCGATAA TGGCAGCTTC TCACCACTGT GGGGACAAAA TGCCTGGACT
GGCAATTATT ACTCTCGCAG TATGCGCAAC CTACCTTCGA AGCACCCGGA AAATCGATTC
TACAGTTTGA CGGCTGGCTT ACATGATCAG ATCCACTGCA CGACAACCTC CGGCCGAAGT
ACATGTTCAA AAGGAGCGCT ATTCACACCA GAAACAAATG TCATTTCCCA ACTACAGCTG
GGAGCGGGCA CAACTGCAAG TGCACTCGAC TTCAACTTCA GTGATTTGAG CCCCTATAAC
CTATCCGGTG GAGATCTGGA TGGTGTCGGA CACTTCAACA GCAAAATTAA TAGTGGTGCC
ATCTTAGTGA AGATGCTGAC AAGCGACTGT AAGGGTACAG CTTGTGCGGT CGACTACGTA
AGTGGCCCGG TAATCGATGC GTTTTAA
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| Protein sequence | MIKGLKMHLW ILPVLLISSS AHSVECNNHN GFICSDSNYQ FSDNFINQDK YPDGGFGGGS
CQANKTPVIF LHGNGDNAIG WALPPSVSPE SYPQAPFSVY ESFKQAGYND CELFGLTYLS
TKQRQSPQLN YHDASTQETI HQFIDNVLAY TGQTKVNIVA HSLGVSMALS SLYKHQAWDK
IDRFINIAGA IRGLQSCLYT GYANALAPTC GSQNLYDANT FGLYPDNGSF SPLWGQNAWT
GNYYSRSMRN LPSKHPENRF YSLTAGLHDQ IHCTTTSGRS TCSKGALFTP ETNVISQLQL
GAGTTASALD FNFSDLSPYN LSGGDLDGVG HFNSKINSGA ILVKMLTSDC KGTACAVDYV
SGPVIDAF
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