| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3526 |
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| Symbol | |
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| ID | 5612106 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 4295811 |
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| End bp | 4297007 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640934479 |
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| Product | putative iron-sulfur cluster binding protein |
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| Protein accession | YP_001475258 |
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| Protein GI | 157376658 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1600] Uncharacterized Fe-S protein |
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| TIGRFAM ID | [TIGR00276] iron-sulfur cluster binding protein, putative |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAGACA CTCCCGTTAG CCAATCTAAT TTCTACACTC TCTCGCCTGG CGATCTCACA
CGACTCGCAC TGCAGATAAA ACAGTGGGGC CAGGAGCTGG GCTTTGCCCA AATAGGAATA
TGCGACACCG ACCTAACAGC GCAAGAGCCT CAACTGCAGC AGTGGTTAGA CAATGGCTAT
CATGGTGAGA TGGGCTATAT GGAAAGTCAT GGCATGATGC GGGCTCGCCC CCATGAACTG
CATCCGGGGA CAACACGGGT GATCTCTGCG CGCATGGATT ATCTGCCACC AAAAGCTGGA
TTTGCCACCA ACCTGAGCGA TCCAAACTTA GCCTATATTT CACGTTATGC CGGCGGCCGT
GATTATCACA AGATGATCCG CAACAGGCTT AAAAAACTGG GACAGATGAT AGAAGCTGAG
TTGCTCAACC TGGGAGCCAG CAAGCCCGGT TTCAGACCAT TTGTCGACTC GGCCCCCATC
TTAGAGCGGC CATTGGCCGC TAAAGCGGGT CTGGGCTGGA CCGGAAAGCA CAGCTTGTTA
CTCAATCAAG ATGCCGGTAG CTGGTTCTTC TTAGGCGAGC TCTTCATCGA CTTGGCACTG
CCTGTTGATA TTCCTGTGGT AGAGGGATGC AATACCTGTG TTGCCTGCAT CAAATCATGC
CCGACTAATG CCATAGTCGA GCCCTATATT GTCGATGGCA GACGCTGTAT CTCCTACCTG
ACAATTGAAC TACAGGGTGC GATTCCTGAA GAATTTCGGC CTCTTATCGG TAATCGAATC
TACGGCTGTG ATGACTGCCA GCTCGTGTGT CCGGTAAACA ATAAGGCACC ACTGACTAAT
GAGCATGACT TTCATACCCG AGATCCACTG AAACAACCCC AGCTGCTCAC CCTGTTCGGC
TGGAGCGAAG CCGAGTTTCT CAAGATCACA GAAGGCAGCC CGATACGCCG TATAGGTCAT
AAGCGTTGGC TGAGAAACAT AGCGGTAGCC CTGGGAAATG CACCAGCCTC AAATGATATC
GTCACAGCCC TCGAACAGAG AAAAACCTCT GAAGAAGTTG ACGAGGTGGT CATCGAACAT
ATCGACTGGG CACTCACTCA ACAGCAAGAA AAGCAGTTAC AAGAGCAAGC CTCACCCAAC
AGAAAAACCC AGCGAGTGAT CCGCAGCGTG GAAAAAGGCC TGCCAAGGGA TGCTTAA
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| Protein sequence | MSDTPVSQSN FYTLSPGDLT RLALQIKQWG QELGFAQIGI CDTDLTAQEP QLQQWLDNGY
HGEMGYMESH GMMRARPHEL HPGTTRVISA RMDYLPPKAG FATNLSDPNL AYISRYAGGR
DYHKMIRNRL KKLGQMIEAE LLNLGASKPG FRPFVDSAPI LERPLAAKAG LGWTGKHSLL
LNQDAGSWFF LGELFIDLAL PVDIPVVEGC NTCVACIKSC PTNAIVEPYI VDGRRCISYL
TIELQGAIPE EFRPLIGNRI YGCDDCQLVC PVNNKAPLTN EHDFHTRDPL KQPQLLTLFG
WSEAEFLKIT EGSPIRRIGH KRWLRNIAVA LGNAPASNDI VTALEQRKTS EEVDEVVIEH
IDWALTQQQE KQLQEQASPN RKTQRVIRSV EKGLPRDA
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