| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3521 |
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| Symbol | |
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| ID | 5612140 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 4288877 |
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| End bp | 4289401 |
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| Gene Length | 525 bp |
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| Protein Length | 174 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640934474 |
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| Product | PAP2 family protein |
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| Protein accession | YP_001475253 |
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| Protein GI | 157376653 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.702348 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGAGATTAG TTTTTGCGAG CATATTATTG TTAATGTGTG GGCCGGCAAT GGCGAAATCG
AACCTGGAAA AGTCCGGGGA TATATTGCAC CTGTTGCTCC CTGCTGCCAC TTTTGGTGCG
ACATTAGCCT ATGAAGATGA CTTCGAAGGT AGCTGGCAAC TCATCAAGAC GGGGGTGGTT
TCTCGTATCG CTGTCGAAGG GCTGAAATAT GCCGTCGATA AAGAGCGTCC CGATGGTTCC
GATATGGACT CATTTCCCTC TGGCCACACC GCCGATACCT TCGCCGCCGC GACATTTGTG
CAGCAGCGCT ATGGTTGGGA GTGGGCAATA CCCGCTTATG TCGGTGCTGC CTATGTCGGC
TACACCCGGG TTGCCAGCGA TCAACACCAT GTAGAAGATG TGCTTGTAGG CGCCGCCATT
GGCGTACTAT CCGGCCTGTA TTTTACCGAC CCTTATAAAG GCATCGCCAT TACCCCTATT
GCGGGAAATG GGAATTATGG CCTGTATGTG AGTGGTAAGT TCTAA
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| Protein sequence | MRLVFASILL LMCGPAMAKS NLEKSGDILH LLLPAATFGA TLAYEDDFEG SWQLIKTGVV
SRIAVEGLKY AVDKERPDGS DMDSFPSGHT ADTFAAATFV QQRYGWEWAI PAYVGAAYVG
YTRVASDQHH VEDVLVGAAI GVLSGLYFTD PYKGIAITPI AGNGNYGLYV SGKF
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