Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_3511 |
Symbol | |
ID | 5612282 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | + |
Start bp | 4278811 |
End bp | 4279212 |
Gene Length | 402 bp |
Protein Length | 133 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640934464 |
Product | hypothetical protein |
Protein accession | YP_001475243 |
Protein GI | 157376643 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.142709 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACGACA TCATTGAGCA ACTACAGGAA CTGAGCGAAA CAGTTCCTAT CCCTTTAGAA CTCCCGACCT TTGAACAAAT CGTGGTCGTT GAAGAGGAGA TCCTCATGCC TCTGCCTTCA GAGCTAAAGG AATACCTTCT TTACGCCAGT GATGTCATCT ATGGAACCAT CGAGCCTGTA ACGGCCAGCG ACCCATATTC GCACACCTAC CTGTCTGAAG TGACCGCCTA TGCCTGGTCT ATTGGTATGT CACGTGAATA CGTGGCCATA TGCCAACAGG GCAATAGTTT CTACTGCATC GATCAGGAAG GTCAGGTCAT GCTCTGGAGC GAAGATGGGC TCGAAAGCGA AACCTGGGAA TCGTTCTGGC AATGGGCCGA AGAGGTCTGG ATGCAAAGTT AA
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Protein sequence | MHDIIEQLQE LSETVPIPLE LPTFEQIVVV EEEILMPLPS ELKEYLLYAS DVIYGTIEPV TASDPYSHTY LSEVTAYAWS IGMSREYVAI CQQGNSFYCI DQEGQVMLWS EDGLESETWE SFWQWAEEVW MQS
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