Gene Ssed_3511 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsed_3511 
Symbol 
ID5612282 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sediminis HAW-EB3 
KingdomBacteria 
Replicon accessionNC_009831 
Strand
Start bp4278811 
End bp4279212 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content50% 
IMG OID640934464 
Producthypothetical protein 
Protein accessionYP_001475243 
Protein GI157376643 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.142709 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACGACA TCATTGAGCA ACTACAGGAA CTGAGCGAAA CAGTTCCTAT CCCTTTAGAA 
CTCCCGACCT TTGAACAAAT CGTGGTCGTT GAAGAGGAGA TCCTCATGCC TCTGCCTTCA
GAGCTAAAGG AATACCTTCT TTACGCCAGT GATGTCATCT ATGGAACCAT CGAGCCTGTA
ACGGCCAGCG ACCCATATTC GCACACCTAC CTGTCTGAAG TGACCGCCTA TGCCTGGTCT
ATTGGTATGT CACGTGAATA CGTGGCCATA TGCCAACAGG GCAATAGTTT CTACTGCATC
GATCAGGAAG GTCAGGTCAT GCTCTGGAGC GAAGATGGGC TCGAAAGCGA AACCTGGGAA
TCGTTCTGGC AATGGGCCGA AGAGGTCTGG ATGCAAAGTT AA
 
Protein sequence
MHDIIEQLQE LSETVPIPLE LPTFEQIVVV EEEILMPLPS ELKEYLLYAS DVIYGTIEPV 
TASDPYSHTY LSEVTAYAWS IGMSREYVAI CQQGNSFYCI DQEGQVMLWS EDGLESETWE
SFWQWAEEVW MQS