| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3498 |
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| Symbol | |
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| ID | 5612672 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 4263716 |
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| End bp | 4264498 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640934450 |
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| Product | hypothetical protein |
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| Protein accession | YP_001475230 |
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| Protein GI | 157376630 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1496] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00726] uncharacterized protein, YfiH family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.972564 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0227032 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCACCAT TCTTAATTAA TAGAGATTGG CATATTCCTC AAGGAGTGAG GATTGCTTTT
TCTACTCGCC GAGACGGCGT AAGTGAATTT CCGTATAAGA GTCTTAATTT GGGACTACAT
GTCGGGGATT GCGAAGAAAA AGTACTGAAA AACAGAGCGC TCATTTACGA GCGCTTTGAT
CTTCCCGATT TCCCTGCATG GTTAGAGCAA ACTCATAGCA CCAGAGTCAT CGAAGCTGAT
AATAAAACGG TTCATAATGC CGATGGTAGC TATTCTGAAC GGTCAAAACA GGTCTGTGTA
GTGATGACCG CAGATTGTTT GCCTGTGTTA CTCTGTGACC GGAATGGCTC TGAGGTTGCC
GCTGTTCACG CAGGCTGGAA AGGACTAAGT GATGGAATTA TTGAGGTGGC ACTCGATAAG
TTCAAGTCTG ATAAAGCACA GCTTATCGCT TATCTTGGGC CGGCAATTAG TGCCGATGCC
TTCGAAGTCG GCGAAGAGGT TAGGAGGATG TTTATCTCTC AGCATCCGAC CAGCGACATT
TTTTTCATAA AAAAAGAGCC CTTAGCTCTT ATCTCTACCC CAGGAACTGA AAACTCCTTA
GTTTCAACTG AGCAGAAATA CTTTGCAGAC CTTCAAGGGT TGGCAAAGTT TCGGCTGAAT
TTAGCTGGTG TCTCTGAGGT TTATCTGGCC GATACCTGTA CTTTTAAAAA CGCTGATGAT
TACTTCTCAT ACCGCAGAGA TCAAATCACT GGTCGCATGG CTTCATTTAT TTGGTTGGCA
TAG
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| Protein sequence | MAPFLINRDW HIPQGVRIAF STRRDGVSEF PYKSLNLGLH VGDCEEKVLK NRALIYERFD
LPDFPAWLEQ THSTRVIEAD NKTVHNADGS YSERSKQVCV VMTADCLPVL LCDRNGSEVA
AVHAGWKGLS DGIIEVALDK FKSDKAQLIA YLGPAISADA FEVGEEVRRM FISQHPTSDI
FFIKKEPLAL ISTPGTENSL VSTEQKYFAD LQGLAKFRLN LAGVSEVYLA DTCTFKNADD
YFSYRRDQIT GRMASFIWLA
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