| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3485 |
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| Symbol | |
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| ID | 5612836 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 4242522 |
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| End bp | 4244378 |
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| Gene Length | 1857 bp |
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| Protein Length | 618 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640934433 |
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| Product | peptidoglycan glycosyltransferase |
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| Protein accession | YP_001475217 |
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| Protein GI | 157376617 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0768] Cell division protein FtsI/penicillin-binding protein 2 |
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| TIGRFAM ID | [TIGR03423] penicillin-binding protein 2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000075861 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.000000000100578 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | GTGGCGCCAA AGAAGCGGAT AACTATGCAT GACCACGCAG CGGAGGCATC GCTTTTCAAA
CGAAGAGCAT TGTTTACATT CGCTTGCGTC GTCATTTTGT TGGGAATATT ACTGACAAAC
CTCTATCACC TGCAAATACT CTCTTATACC GACTACGAAA CTCGTTCTAA TGATAACCGT
ATCAGAGTTG TACCTGTCGC GCCGAGTCGA GGCCTGATAT TCGACCGCCA TGGCAAGCTC
TTAGCTGAAA ATCAGCCTTT CTTTTCCTTA GAACTCATCC CTGAGAAAGT AAAAGATGTC
CCCGCAGTAC TGGCTGAATT AAGTACGCTT ATCCCACTGT CTGCCGATGA GCAGGAAGAT
TTCCAAAAGT CACTGAAATA TCACAGACGT TTTAAGCCGT TAACGCTAAA GAACCGCCTG
AGCGAAAGTG AAGTCGCACT GTTCAGCGTC AATCGTCATC GATTTCCAGG TATATCTGTG
GTTGCCGGAC TAAAACGTCA CTACCCTTAC AACGGAATGA TGACCCATGC ATTAGGTTAT
GTAGGAAGAA TTAACGACCG AGATCGAGCA GCATTACAAC GTAATGACCT ATGGAAAAAT
TACGCAGCAA CCAAATACAT AGGTAAGCAA GGTATCGAGA AGTTCTATGA AAATCTGCTT
CATGGTCAGC CAGGTCATTT AGAGGAAGAG GTCAATAATC GAGGCCGCAC AATTCGAACT
CTAAAATCAG TTCCGCCGGT ACCGGGTCAG GATATCTACC TGACTCTAGA CTTACAGCTA
CAAGAAAAAG CCGTTGAATT GTTAAATGGA CGCAGGGGCT CTGTCGTCGC TATCGACCCT
CGTGATGGCG GAATATTGGC TATGGTGTCG AGTCCTACCT ATGACCCGAA TCTTTTTGTA
CACGGGATCA GTACCAAGGC ATACAATGAG CTACTCAACT CTCGCTCCCG CCCTCTGATT
AACCGAGCGA CCCAAGGACA GTATGCACCA GCTTCGACAG TTAAGCCCCA TATCGCATTA
CTCGGGTTGG AAGATAAAAC AATCACAGAA AAGACCCGAG TCTGGGACCC CGGCTTCTGG
CAGATCCCCG GCGTCGAGAG AAAGTACAGA GACTGGAAAC GCTGGGGACA TGGTTGGGTA
GATGTAAATA GCGCCTTAGT CGGCTCTTGC GATACCTACT TTTATGAGCT TGCCTATAAA
ACAGGTGTAG ATAAGATTGC TAACTTCATG CAACCCTTTG GTTTTGGTGA GCGAACCGGC
GTCGACATTT TTGAAGAGTC GGCGGGCATC ATGCCATCGA AAGATTGGAA GCGCATGAGG
TACAACCAAC CTTGGTATAT CGGAGATACC ATCTCTGTAG GTATCGGTCA GGGCTACTGG
ACCACAACAC CATTACAACT CGCCAACGCT GCAGCGATTA TGGCGAACAA AGGCAAACGC
TTTGTGCCAC ATCTGTTGAA ATCAATAAAA GACAGCACGG CAAAAATTAA CTCTCCCGTC
GATGAGATGG CACCGATTGA GCTTAAAGAC CCTAAAAACT GGGAGATCAT CAATAATGCG
ATGAGAGATA CGGCTCATAA GAAACGATTC AAAGATGCGA CCTATACTGC CGCGATGAAA
ACCGGTACGG CTCAAGTTAT CAATGTGGCC GCAGATGCAA AATATGATGC AGATAATATC
GATGAACACT TGCGAGATAA CGCATTAGTC ATTGCCTATG CCCCCTTTGA AAATCCCAAG
GTTGTATTGG CCGTGGTACT TGAAAATGCG GGCTGGGGTG GCGCTAATGC GGGGCCAGTT
GCCAGAGCTC TGCTGGATGA ATATATGTTA CGAGATAGCT GGGAGTCGAT TCAATGA
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| Protein sequence | MAPKKRITMH DHAAEASLFK RRALFTFACV VILLGILLTN LYHLQILSYT DYETRSNDNR
IRVVPVAPSR GLIFDRHGKL LAENQPFFSL ELIPEKVKDV PAVLAELSTL IPLSADEQED
FQKSLKYHRR FKPLTLKNRL SESEVALFSV NRHRFPGISV VAGLKRHYPY NGMMTHALGY
VGRINDRDRA ALQRNDLWKN YAATKYIGKQ GIEKFYENLL HGQPGHLEEE VNNRGRTIRT
LKSVPPVPGQ DIYLTLDLQL QEKAVELLNG RRGSVVAIDP RDGGILAMVS SPTYDPNLFV
HGISTKAYNE LLNSRSRPLI NRATQGQYAP ASTVKPHIAL LGLEDKTITE KTRVWDPGFW
QIPGVERKYR DWKRWGHGWV DVNSALVGSC DTYFYELAYK TGVDKIANFM QPFGFGERTG
VDIFEESAGI MPSKDWKRMR YNQPWYIGDT ISVGIGQGYW TTTPLQLANA AAIMANKGKR
FVPHLLKSIK DSTAKINSPV DEMAPIELKD PKNWEIINNA MRDTAHKKRF KDATYTAAMK
TGTAQVINVA ADAKYDADNI DEHLRDNALV IAYAPFENPK VVLAVVLENA GWGGANAGPV
ARALLDEYML RDSWESIQ
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