| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3481 |
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| Symbol | |
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| ID | 5613278 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 4239646 |
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| End bp | 4240686 |
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| Gene Length | 1041 bp |
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| Protein Length | 346 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640934429 |
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| Product | DNA-directed DNA polymerase |
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| Protein accession | YP_001475213 |
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| Protein GI | 157376613 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1466] DNA polymerase III, delta subunit |
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| TIGRFAM ID | [TIGR01128] DNA polymerase III, delta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000216936 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.0000000000757173 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGAGGGTCT ACCCGGATCA GCTAGCCCGT CATCTCAAAC CGCTGCAACA GTGCTACCTC
ATATTTGGCG ATGATCCTTG GCTATGTGAA ACAAGTCGAA CCCAGATCTA TGCTCAGGCT
AAACGTGATG GTTTTGAAGA GAAAGTTCAG TTAACACAAG AGAACAATTT TAACTGGAAT
GAGTTAGTTG ACGAATGGCA GGCGATGAGC TTGTTTTCGA GCAGACGAGT CATCGAGCTC
ACACTTCCGC AAGCCAAACC CGGCAGCGAA GGTGGCACTA TTTTTCAACA CTTAATGCAG
ATGGAAAATC CAGATGTTCT GTTGATAATA ACGGGTCCCA AACTCGCAGC AGAGCAGACA
AAGAGTAAAT GGTTTAAGAC TCTGGACGCT AAAGGCGTCT ACATCCCCTG CGCAACTCCC
GAAGGTCAGC AATTTCAGCG CTGGCTCGAT GGCCGCATCA GTCACTTTAA GTTGCTATTG
ACTCGCGATG CCAGAGAGAT GTTATTCAGC CTTTACGAAG GAAATTTACT CGCAGCCGAC
CAATCATTAC AACTGCTCCA GCTGCTAAGT CCCAACACTG AGATAAACAG TCAACAACTC
GAGTCTTATT TCGAAGATCA ATCGCGATTC AGTGTGTTTC AGCTCACCGA TGCCATGTTA
TATAATCATC AGGACAAAGC CCAACATATC CTTTCACAGC TAAAGGCTGA GGGAGTTGCC
ATGCCGATAA TTATGTGGGG AATATTTAAG GAGCTAGCGA TTTTACTGCA GCTAAAGAGT
GCGCTTGAGA GTCAACAATC GCTTCAAACT CTTTGGAGCA AGCTCAGGAT CTGGGATAAG
CGTAAACCTT TATACCAAGC TGCACTTAAC AGGCTGACGC TCACTCAAAT TGAGTCTTTG
CTCTGCGGGG CATCTGCCAT CGAATTAAAG CTCAAACAAC AGGGAATGGA AGACTGGACA
GGTATGAGCC ATCTATGCCT GCTGTTTGAC CCTAAAGCAC ATGCTCGCTT ATCCCATATT
GAACTCAACG AATGGAGCTA A
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| Protein sequence | MRVYPDQLAR HLKPLQQCYL IFGDDPWLCE TSRTQIYAQA KRDGFEEKVQ LTQENNFNWN
ELVDEWQAMS LFSSRRVIEL TLPQAKPGSE GGTIFQHLMQ MENPDVLLII TGPKLAAEQT
KSKWFKTLDA KGVYIPCATP EGQQFQRWLD GRISHFKLLL TRDAREMLFS LYEGNLLAAD
QSLQLLQLLS PNTEINSQQL ESYFEDQSRF SVFQLTDAML YNHQDKAQHI LSQLKAEGVA
MPIIMWGIFK ELAILLQLKS ALESQQSLQT LWSKLRIWDK RKPLYQAALN RLTLTQIESL
LCGASAIELK LKQQGMEDWT GMSHLCLLFD PKAHARLSHI ELNEWS
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