Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_3479 |
Symbol | leuS |
ID | 5613276 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | + |
Start bp | 4236355 |
End bp | 4238946 |
Gene Length | 2592 bp |
Protein Length | 863 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640934427 |
Product | leucyl-tRNA synthetase |
Protein accession | YP_001475211 |
Protein GI | 157376611 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0495] Leucyl-tRNA synthetase |
TIGRFAM ID | [TIGR00396] leucyl-tRNA synthetase, eubacterial and mitochondrial family |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0000160913 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCAAGAGC AATATAAACC TTCAGAAATT GAAGCTAAAG TGCAGCAGCA CTGGCAAGAC AAAAAAACAT TTGAAGTCAC CGAAGACGAA AACAAAGAGA AATTCTACTG TCTCTCTATG TTTCCTTACC CTTCTGGCCG GCTACACATG GGTCATGTTC GTAACTACAC CATAGGTGAC GTTGTCGCTC GTTACCAGCG ACTTCAGGGA AAAAATGTAT TACAGCCTAT AGGTTGGGAC TCATTTGGTC TTCCTGCTGA AAACGCTGCG ATTAAAAACA ACACAGCCCC GGCGCCTTGG ACATACGAAA ACATCGATTA CATGAAAAAC CAGCTGAAAA TGCTGGGTTT CGGTTATGAC TGGAGCCGTG AGATCGCAAC CTGTACCCCT GAGTATTATC GTTGGGAGCA GTGGTTTTTC ACTAAGCTTT TTGAAAAAGG CTTAGTCTAT AAGAAAACGG CTTCGGTCAA CTGGTGTCCG AACGATGAAA CCGTTTTGGC TAACGAACAG GTTATCGATG GTTGCTGCTG GCGTTGTGAT ACAACGGTAG AGCAAAAAGA GATCCCACAG TGGTTTATCA AGATCACTGA GTATGCAGAC GAACTCCTTA AAGATATCGA TCAGTTAGAC GAATGGCCTG AGCAAGTTAA GACCATGCAA CGTAACTGGA TTGGACGCAG CGAAGGCATC GAGATGACTT TCGGCGTTGT CGATAGCGAA GAGACATTCG ATATCTACAC CACGCGTCCG GATACTGTAA TGGGTGTAAC TTATGTTGCC ATTGCAGCAG GTCACCCGCT TGCAGAAAAA GCAGCAGCAA ACAACTCAGA GCTTTCCGAC TTTATCGAAG AGTGTAAAAA CGCCGATACT ACCGAAGCCG CTATGGCTGC GATGGAAAAG AAAGGTGTTG CTACTGGTCT GTATGCCACT CATCCACTAA CCGGTAAGCA AGTACCTATC TGGGCCGCTA ACTTCGTATT GATGAACTAC GGTACAGGCG CTGTAATGTC AGTCCCAGCT CACGATCAAC GTGATTATGA GTTTGCGACT AAATACGGCT TAGCTATCGA AGGCGTTATT AAGCCAAGCG ATAGCGACTT AGACATCAGC GAAGAAGCTT ACACAGAAAA GGGCGTATTG TTTAACTCAG GCGACTCTTT TCCCGAGCTG GATGGCCTGG ACTTCCAAGA CGCTTTTGAT GCCATCGATG CCAAGCTATC GAGTGAAGGC AAGGGTAAGC GTCAGGTAAA CTTCCGTTTA CGCGACTGGG GTGTCTCCCG TCAGCGTTAT TGGGGGGCAC CTATCCCTAT GGTCACGCTT GCTGACGGTA CAGTCGTTCC TACACCGGAA GATCAACTGC CTGTCATTTT GCCTGAAGAT GTGGTCATGG ATGGAATCCA AAGCCCAATC AAGGCTGACA AAGAGTGGGC TAAAACTCAG ATTAATGGCC AGGAAGCGTT CAGAGAGACA GATACCTTCG ACACTTTTAT GGAGTCATCT TGGTATTATG CGCGTTACTG TAGTCCACAT GCCGATGAGA TGTTAGACCC GGCTAAGGCT AACTACTGGC TGCCGGTAGA TCAGTATATC GGTGGTATTG AGCATGCGTG TATGCATCTG CTTTACTTCC GTTTCTTCCA TAAATTACTG CGTGATATTG GTTTAGTTAA CTCTGATGAG CCAGCGAAGC GTCTATTGAC TCAAGGTATG GTATTGGCCG ATGCTTTCTA CTATAACAAC GAGAAAGGCG CGCGGGTTTG GGTTGCTCCG TCAGATGTGA CCGTTCAGGA AACTGACGAG AAAGGCCGCA TCCAAAAAGC CGTTGACAGC GAAGGTCATG AGCTTGTCTA TACCGGTATG AGCAAGATGT CTAAGTCTAA AAACAACGGC ATTGATCCTC AAGTGATGGT AGATAAGTAC GGCGCCGACA CCGTGCGTCT GTTTATGATG TTTGCCGCGC CACCTGAGCT GACGCTTGAA TGGCAAGAGT CGAGTGTTGA GGGTGCACAT CGCTTTATTA AGCGTTTGTG GAAAGTCGCC CATGACCATG TTGCTAAAGG CGCCACTGCT CCGTTAGACG TTAAAACTCT CGATACTAAA CAGAAAGAGC TACGTCGTGA ACTGCACAAG ACCATAGTTA AGGTCGGTGA TGATATTGAA CGTCGCCAAA TGTTCAATAC AGCCATCGCC TCCGTGATGG AGCTGATGAA TCGTCTTCAG AAAGCACCAA CTGAAACTCA GCAAGACCGT GCTCTGATGC AAGAAGCACT TTCTGCAGTT GTCCGTCTGC TTTACCCTAT CATTCCACAC ACTAGCTTTA GCCTGTGGAA TGATCTTGGG AATGAAGAGA ACATCGAAGA TGTGCGTTGG CCTGAAGCCG ATCAGTCTGC ACTCGTTGAA GATAGCAAGC TAATTATCGT TCAAGTCAAC GGTAAACTGC GTGCCAAGAT CACCGTTCCA GCCGATGCGA CTAAAGAGGT TGTTGAGGAA CAAGGTTTTG CAGAAGAGGG TGTGATTAAA CATACCGAAG GTAAAACCGT TCGCAAAGTT ATCTATGTAC CGGGCAAATT GCTCAACATC GTGGCTAACT AG
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Protein sequence | MQEQYKPSEI EAKVQQHWQD KKTFEVTEDE NKEKFYCLSM FPYPSGRLHM GHVRNYTIGD VVARYQRLQG KNVLQPIGWD SFGLPAENAA IKNNTAPAPW TYENIDYMKN QLKMLGFGYD WSREIATCTP EYYRWEQWFF TKLFEKGLVY KKTASVNWCP NDETVLANEQ VIDGCCWRCD TTVEQKEIPQ WFIKITEYAD ELLKDIDQLD EWPEQVKTMQ RNWIGRSEGI EMTFGVVDSE ETFDIYTTRP DTVMGVTYVA IAAGHPLAEK AAANNSELSD FIEECKNADT TEAAMAAMEK KGVATGLYAT HPLTGKQVPI WAANFVLMNY GTGAVMSVPA HDQRDYEFAT KYGLAIEGVI KPSDSDLDIS EEAYTEKGVL FNSGDSFPEL DGLDFQDAFD AIDAKLSSEG KGKRQVNFRL RDWGVSRQRY WGAPIPMVTL ADGTVVPTPE DQLPVILPED VVMDGIQSPI KADKEWAKTQ INGQEAFRET DTFDTFMESS WYYARYCSPH ADEMLDPAKA NYWLPVDQYI GGIEHACMHL LYFRFFHKLL RDIGLVNSDE PAKRLLTQGM VLADAFYYNN EKGARVWVAP SDVTVQETDE KGRIQKAVDS EGHELVYTGM SKMSKSKNNG IDPQVMVDKY GADTVRLFMM FAAPPELTLE WQESSVEGAH RFIKRLWKVA HDHVAKGATA PLDVKTLDTK QKELRRELHK TIVKVGDDIE RRQMFNTAIA SVMELMNRLQ KAPTETQQDR ALMQEALSAV VRLLYPIIPH TSFSLWNDLG NEENIEDVRW PEADQSALVE DSKLIIVQVN GKLRAKITVP ADATKEVVEE QGFAEEGVIK HTEGKTVRKV IYVPGKLLNI VAN
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