| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3475 |
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| Symbol | lnt |
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| ID | 5613361 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 4230617 |
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| End bp | 4232176 |
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| Gene Length | 1560 bp |
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| Protein Length | 519 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640934423 |
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| Product | apolipoprotein N-acyltransferase |
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| Protein accession | YP_001475207 |
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| Protein GI | 157376607 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0815] Apolipoprotein N-acyltransferase |
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| TIGRFAM ID | [TIGR00546] apolipoprotein N-acyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.00817837 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCTGAATA AACTTCGGGC ATTCGCCCAT CATTCTAAAA TTCGTCTGGT GCTGGCATAC
TTTGCCGGTG CCAGTACGGC TCTTGCTTTT GCCCCCTATG CGATATGGCC GATATACCTG
TTAGCCATGA TCTTTGCGTT GCACCAAAGC CGCTGCCTAT CAGCAAAAGC TGGATTTTCT
TATTGGTTAA GTTTCGGCTT CGGGTGTTTC TCTGTCGGCA TTAGCTGGGT CCATGTGAGT
ATGGACAAGT TTGGTGGATT GCCACTTATT GCCTCGATAG GCTTAATGGC CCTGTTAGCT
CTCTATCTTG CCATTTACCC TGCCATTGCT GGTTACCTCA TGCAAAAGCT TGCTCCAAAC
GCAGCTTTAA TGAGGAACAT TATTCTTTTT CCTGCTTTAT GGACCCTAAC TGAATGGGTG
AGAGGCTGGA TGTTAACCGG TTTCCCCTGG CTGTGGGCCG GTTATTCACA AACAGAGGGA
CCAATAAAGG AACTTGCCAC CGCCGTAGGC GCATTAGGCC TAAGCTACCT TATCGCTATG
CTGGCCGGAG CATTAGCACT GTGTCTGCAG AAACAATTTA GAAGCGCAGT CATCCTTATC
CCCCTGTTAA TCATTGCCAC TTATCTCGCT CCTAAGCTTT CAACAATCGA GCCAAAAGAT
GAGTCTGTAA GAGTTGTATT AGTGCAGGGC AACATTCCCC AGAGTATGAA ATGGGACCCC
GATGCACTTT GGCCGACGAT GAGTAAGTAC ATGGACCTGA CCAGGCCTGA ACTCAATGCA
GATATTATCA TCTGGCCCGA GGCCGCTATT CCGGCCCCGG AATATATGGT CTCCGAGTTT
CTTGATAATG CAAATAAGGT CGCTAACCTT AACCAGAGTG CAATTATCAC AGGCATCATC
AGCCACCAGC AGGATAGTTT CTATAACTCT TTAATTGTAC TCGGTAACCA CAATGAAAAA
GTGCAAATTC AGGCGAACTA TCTAGGCGAT GGCACAAATG AGTTTAAGAA ACATCACCTG
CTTCCAATCG GGGAGTTTGT GCCATTCGAG ACGCTGTTAA GGCCCATAGC GCCTCTTTTC
AACTTACCTA TGTCCTCCTT CGCCCGTGGC CAGTACCAAC AACCAAACCT CAATGCCTTG
GGACACCAGA TTGCCCCCGC TATCTGTTAC GAGATCGCAT TTCCCGAACA GTTAAGGGCC
AATGTTAATC AGGATACAGA GCTTTTACTG ACCGTATCAA ACGATGCCTG GTTTGGCACC
TCTAATGGTC CCTTGCAGCA TATGGAGATC GCGCAGATGC GCTCCATAGA GTTGGGCAGG
CCCTTGGTTC GCGCCACCAA TAACGGTTTA ACAGCTGTCG TCAACGAGAT GGGTAACATT
ACCCACCAGC TACCTCAGTT TGAATCGGGG GTGCTCGTAG CTGATATTCC ACTGGTAAAA
GGTCAAACCC TGTTTGCGCT ATGGGGCCAG TGGCCGGTAC TGATATTATC GGGCTTATTA
TTGCTAGTTG GGATCGGCCG AAGCAGGTTC CCCCTCTCTT CACGCAGTAA AAATATCTGA
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| Protein sequence | MLNKLRAFAH HSKIRLVLAY FAGASTALAF APYAIWPIYL LAMIFALHQS RCLSAKAGFS
YWLSFGFGCF SVGISWVHVS MDKFGGLPLI ASIGLMALLA LYLAIYPAIA GYLMQKLAPN
AALMRNIILF PALWTLTEWV RGWMLTGFPW LWAGYSQTEG PIKELATAVG ALGLSYLIAM
LAGALALCLQ KQFRSAVILI PLLIIATYLA PKLSTIEPKD ESVRVVLVQG NIPQSMKWDP
DALWPTMSKY MDLTRPELNA DIIIWPEAAI PAPEYMVSEF LDNANKVANL NQSAIITGII
SHQQDSFYNS LIVLGNHNEK VQIQANYLGD GTNEFKKHHL LPIGEFVPFE TLLRPIAPLF
NLPMSSFARG QYQQPNLNAL GHQIAPAICY EIAFPEQLRA NVNQDTELLL TVSNDAWFGT
SNGPLQHMEI AQMRSIELGR PLVRATNNGL TAVVNEMGNI THQLPQFESG VLVADIPLVK
GQTLFALWGQ WPVLILSGLL LLVGIGRSRF PLSSRSKNI
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