| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3472 |
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| Symbol | |
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| ID | 5613462 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 4228165 |
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| End bp | 4229208 |
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| Gene Length | 1044 bp |
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| Protein Length | 347 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640934420 |
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| Product | PhoH family protein |
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| Protein accession | YP_001475204 |
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| Protein GI | 157376604 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1702] Phosphate starvation-inducible protein PhoH, predicted ATPase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.020153 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0289175 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTCTAACA AGTTAACGAC GCTGAACCTC TATTTAGAGC CAGCAGATAC ACGTAGATTA
ATCTCCCTTT GTGGACCATT CGATGACAAT ATCAAGCAAC TTGAACGCCG TATCGGTGTC
GAGGTAAGCT ACCGGGATAA TCATTTTCAA ATCGTCGGAC AAGCCAGAAA TTGCCTCATC
GTCAATAATC TATTGAAAAC ACTTTATATA GAGACTCAAG CAATCAAAGG CAGTACTCCG
GATCTTGAAC CTGATGCCGT TCATTTAGCA ATCCAGGAAG CCGTTGCATT AGAAGCCGAA
GCGCCAAGAG ACGAAAAAGA GCTCTATATT AAGACTAAGC GCGGTGTCAT CAAGCCTCGA
AATCCAAATC AAAGTGATTA CGTCGCTAAC ATAGTTCGTC ACGATATTAC CTTTGGGGTT
GGGCCTGCCG GTACAGGAAA AACTTTTCTT GCCGTGGCTG CCGCTGTCGA CGCCCTGGAA
CATCAAGAGG TTCGTCGTAT ATTACTGACC AGACCTGCGG TTGAAGCCGG CGAAAAATTG
GGTTTTCTTC CGGGCGATCT CAGTCAGAAG GTCGACCCTT ACCTTCGCCC ACTTTATGAT
GCCCTGTTCG AGATGTTAGG ATTTGAAAAA GTAGAGCGCT TAATTGAGCG TAATATCATT
GAAGTGGCCC CTCTTGCCTA CATGCGTGGT CGCACACTCA ATGACGCATT TATCATCTTA
GATGAAAGCC AAAATACAAC GGTTGAACAG ATGAAAATGT TCCTCACTCG TATTGGCTTT
AACTCCAGAG CCGTGATCAC TGGCGATATC ACTCAGATCG ATCTTCCTAA GAGTCAAAAG
TCGGGTCTGC GGCACGCTAT TGAAGTGTTA AGTGAAGTTG ATGAGGTGAG TTTCAACTTC
TTCCAGGCTA AAGATGTCGT TCGTCATCCC ATTGTAGCCA GAATTGTTGA AGCCTATGAA
GAACACGAGC AACGAATTCA AGTGGCTAAA GCTAAGAAAG ATAGCCAATA TAAGCTTCAG
GGAACCCCGG AAAATGAACA CTAG
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| Protein sequence | MSNKLTTLNL YLEPADTRRL ISLCGPFDDN IKQLERRIGV EVSYRDNHFQ IVGQARNCLI
VNNLLKTLYI ETQAIKGSTP DLEPDAVHLA IQEAVALEAE APRDEKELYI KTKRGVIKPR
NPNQSDYVAN IVRHDITFGV GPAGTGKTFL AVAAAVDALE HQEVRRILLT RPAVEAGEKL
GFLPGDLSQK VDPYLRPLYD ALFEMLGFEK VERLIERNII EVAPLAYMRG RTLNDAFIIL
DESQNTTVEQ MKMFLTRIGF NSRAVITGDI TQIDLPKSQK SGLRHAIEVL SEVDEVSFNF
FQAKDVVRHP IVARIVEAYE EHEQRIQVAK AKKDSQYKLQ GTPENEH
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