| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3451 |
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| Symbol | |
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| ID | 5610734 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 4201704 |
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| End bp | 4202957 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640934391 |
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| Product | hypothetical protein |
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| Protein accession | YP_001475183 |
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| Protein GI | 157376583 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5505] Predicted integral membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTAGTA CCGCTTTAGT GACGAATGAT GCCACAGGTT TAGGCCTGCT GGCCGTGATT
TTAGGTTTCG TATTTTATAC CAGTCACAGC AAACATCCTT TCTGGAAGAA GTTTTACAAA
TTCATTCCTG CGTTATTGAT GTGCTATTTC CTGCCGTCCT TGCTCAATAC GTTTAACATT
ATCGACGGGC ATACTTCTCA ACTTTACTTC GTTGCATCTC GTTACCTGCT ACCTGCGTGT
CTGGTTCTGC TGATCTTAAG TGTCGATCTA AAGGCTATTC TCTCTTTGGG GCCAAAAGCG
ATCATCATGT TCCTGACCGG TACGGTTGGT ATCGTGATCG GTGGGCCCAT TGCTCTGCTC
ATTATCTCCA GCCTTAACCC CGAAATTATC GGTGGTCATG GACCCGAAGC CGTTTGGAGA
GGAATGACCA CGCTGGCAGG CAGCTGGATT GGCGGCGGTG CCAACCAGGC AGCCATGAAA
GAAATTTATG AAGCGGGTGG TGACATCTTC TCTATCATGG TGACCGTCGA TGTTATCGTG
GCCAACATCT GGATGGCTGT GTTGCTGTTT ATGGCATCTA AAGCCAAGCA GATAGATAAG
AAGACCGGGG CCGATACGAG TGCTATCGAG AGACTCAAAG AAAAAGTTGA AAAGTACCAC
GCCGAGAATG CACGCATTCC GAGCTTAAAT GACCTGATGA TGATCGTGGC GGTGGGTTTC
GGTGTCACAG GTTTAGCCCA TGTTTTTGCC GATTTCCTTG GCCCATTCTT CGAGGCCAAC
TACCCATGGA CGCGTGACTA TAGCCTGACA TCTAAGTTTT TCTGGTTAAT CGTAACTGTG
ACCAGTATTG GTCTCGCCAT GTCATTTAGC CCGGTTCGTC ACCTTGAAGC TGCCGGCGCA
TCTAAGGTGG CATCTGCGTT CCTTTATATT CTGGTCGCAA CCATCGGTTT GCATATGGAT
GTGTCAAAAC TTGCCGATCC CGATAACCTT TGGTACTTCG CGATCGGTAT AATATGGATG
ATGGTTCATG CGAGCTTTAT GTTGATCGTG GCTAAGTTGA TCAAGGCCCC GCTGTTCTAC
ATGGCGGTAG GTAGCCAGGC CAACGTAGGT GGTGCCGCAT CGGCGCCGGT AGTCGCTGCG
GCATTCCATC CGGCTTTAGC ACCTGTGGGT GTGTTACTGG CGGTATTGGG CTATGCTGTG
GGAACTTATA TGGCGTGGAT GTGCGGACAG ATTTTGCAGA TCATCGCGAC ATAA
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| Protein sequence | MSSTALVTND ATGLGLLAVI LGFVFYTSHS KHPFWKKFYK FIPALLMCYF LPSLLNTFNI
IDGHTSQLYF VASRYLLPAC LVLLILSVDL KAILSLGPKA IIMFLTGTVG IVIGGPIALL
IISSLNPEII GGHGPEAVWR GMTTLAGSWI GGGANQAAMK EIYEAGGDIF SIMVTVDVIV
ANIWMAVLLF MASKAKQIDK KTGADTSAIE RLKEKVEKYH AENARIPSLN DLMMIVAVGF
GVTGLAHVFA DFLGPFFEAN YPWTRDYSLT SKFFWLIVTV TSIGLAMSFS PVRHLEAAGA
SKVASAFLYI LVATIGLHMD VSKLADPDNL WYFAIGIIWM MVHASFMLIV AKLIKAPLFY
MAVGSQANVG GAASAPVVAA AFHPALAPVG VLLAVLGYAV GTYMAWMCGQ ILQIIAT
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