Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_3443 |
Symbol | |
ID | 5609908 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | - |
Start bp | 4193198 |
End bp | 4193683 |
Gene Length | 486 bp |
Protein Length | 161 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640934383 |
Product | putative nucleotide-binding protein |
Protein accession | YP_001475175 |
Protein GI | 157376575 |
COG category | [S] Function unknown |
COG ID | [COG1666] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000000233798 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTTCAA TGGATATTGT TTCTGAAGTC GATGAAGTTG AGCTGCGAAA TGCCGTAGAA AACTCAGTAC GTGAACTGAA GAGTCGTTTC GATTTTCGTG GTAAGGAAGC GAGCATCGAG TATAAAGACC ATGTGGTCAC GCTATCGGCT GAAGATGATT TTCAGTGTCA GCAATTAGTC GACATACTAC GCATGCAGAT GAGTAAGCGT AGTGTCGATC CGGCTTCCAT GGATGTCGAT GAAAAGGCGC TGCATAGTGG CAAGACTTTC TCTTTAAAGG TGCGCTTTAA AGAGGGCATT GAAACCCTGA TCGCTAAAAA GTTAGTCAAG ATGATTAAAG ACAGTAAGCT GAAGGTTCAA TCATCTATTC AGGGTGATTC GGTGCGTGTT ACCGGTAAGA AGCGCGACGA TCTGCAAGCC GTCATGGCAT TGGCTCGTGA GTCTGAATTA GGTCAGCCAT TCCAGTTCAA TAACTTCCGT GATTGA
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Protein sequence | MPSMDIVSEV DEVELRNAVE NSVRELKSRF DFRGKEASIE YKDHVVTLSA EDDFQCQQLV DILRMQMSKR SVDPASMDVD EKALHSGKTF SLKVRFKEGI ETLIAKKLVK MIKDSKLKVQ SSIQGDSVRV TGKKRDDLQA VMALARESEL GQPFQFNNFR D
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