| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3439 |
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| Symbol | |
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| ID | 5611566 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 4189904 |
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| End bp | 4190470 |
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| Gene Length | 567 bp |
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| Protein Length | 188 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640934379 |
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| Product | uncharacterized lipoprotein |
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| Protein accession | YP_001475171 |
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| Protein GI | 157376571 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3056] Uncharacterized lipoprotein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAACGTC TCTTTTTATT ATTAACCGCC GCTATCACAC TTTGTGGTTG CGCGACTCAA
ACGCCAAGTC ACATAGCCCT GGAGCCTCAA GTTCCGCATG TACAGCCTCA AACTCAGTCG
CGACAGAATC TGGCCATAGA GACGATAGAT ACGCGCTCAG CCAATTTTAT TGTGCGCTTC
AACAACGAAG GCGATGCGGC CAAACTTGTC AGCCCTTCTG AAGCACCAAG AAGGCAGATA
GACGCCGTCT TTCGTAAGGG CTTCACTCAA GCGGGTTATC AGGTAGACCC CAGTGCGGTT
CAACATATAC AGTTTCAACT GGAGCAGTTA CTGACTGACG TCAATGAGAG CACCTTCGGA
TTCGAGGCTA AGAGCAACAT CATCATCAAT GTGATCGCTA AAAACAGTAC CCAAGAGCTC
ACTAAACGTT ACACGGCTCG CGGAACACTA TCGGGCCCGT TTAGTGCCGA TTTTGCGACC
TTAGAACTTG AGATAAATAA ACTTCTCGGT CAATTGAGCG GCGATATTAT TAATGATCCT
GAACTGAACC AGTTTATTCA ACAGTAA
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| Protein sequence | MKRLFLLLTA AITLCGCATQ TPSHIALEPQ VPHVQPQTQS RQNLAIETID TRSANFIVRF
NNEGDAAKLV SPSEAPRRQI DAVFRKGFTQ AGYQVDPSAV QHIQFQLEQL LTDVNESTFG
FEAKSNIIIN VIAKNSTQEL TKRYTARGTL SGPFSADFAT LELEINKLLG QLSGDIINDP
ELNQFIQQ
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