| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3436 |
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| Symbol | |
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| ID | 5613528 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 4186304 |
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| End bp | 4187542 |
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| Gene Length | 1239 bp |
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| Protein Length | 412 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640934376 |
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| Product | rRNA (guanine-N(2)-)-methyltransferase |
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| Protein accession | YP_001475168 |
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| Protein GI | 157376568 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2813] 16S RNA G1207 methylase RsmC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAACAC AATTTTCAGT CGAAGGTATC GAGCTAGAAT TAACTCGTTA TCCTAAAAAT
CAGGAATCGA ATTTACAGGC TTGGGATGCG GCCGATGAAC ACCTGATTAA ACACCTTAAA
GAGACTGAAC AAGTGCCTGT TGCTACGGCT ATCATCAATG ATAATTTCGG AGCACTGACA
GCATGCCTGC GTTCGATGGA ATCACAATGG CCATTAGCCG TCGAAACCGA CGCTAAAACC
AGTCAATTAG GCACTGTACA AAACTTAGAA AATAACACAC TCAGCTCAGA TAATATTCAG
TGGCTAAACA GTCGTGAAAA TATACCCGGT GCCATAGAGT TGGTATTGAT GAAATTACCA
AAGAACCTCA GCTATTTTGC CCACCAGCTC AACCGTTTAT CTCAGGTCCT GCCAGAAGGT
ACTCAGGTAT TGATAGGCGC TAAAGCCAAA TCGATCAACA AATCTTTACT TGAGCTTTTT
GCTAAAAATC TGGGCCCGGC GAGCGCCAGT CTGACCTGGA AAAAAACCCG TGTTATCACC
TGTACTGCCG ACGGCAAAGT ACGCGCCCTC CCGACAGAAA GCCAATGGTC GATTCCTGAC
TTAAACCTCA ATATCACCAA TCTCAGCAAT GTTTTTGCTT CCGGCAAGCT CGATATTGGT
GCCCGCATCA TGCTCGACAA CATGCCTAAG GGTGACTTCA AATCGATTAT CGACCTGGGC
TGCGGAAATG GCGTATTGGG GCTCAATGCC AAGCAACTCT TTCCGCAGGC CTATATTCAT
TTTGTGGACG ATTCAGAGAT GGCGGTTGAA TCGGCGAGAC AGAACTGGGC ATTGAATAAA
TTAGATACAC TGGGTCTTGT CGGCGAGCAA GCCACCTTTG GCTGGGATGA TTGTTTAACT
CATCTCAATG AAGGTATTCG CCCCGAACTG ATCCTCTGTA ATCCTCCTTT TCATCAAGGT
GAAGCGATCA CAGACCACAT CGCCTGGCAG ATGTTTCTCC AGTCCTGGCG AGCACTTAAA
AATGGCGGCA TCTTGCATGT CGTGGGTAAC CGCCACCTGG CTTATCACGT GAAACTGCAG
CGTATCTTTA AAAACTGCAC CACAGTCGCC TCTAACGGTA AGTTTGTTAT TTTGCAGGCG
CAGAAGATAA GTAAGAAAGC CGAGCCCCAT GAAAACGGGG AAAGCTCGTC CGACACGCCT
AATCCACAAA GCTCACTCTA TGGCGGCGTA AAACGATAG
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| Protein sequence | MTTQFSVEGI ELELTRYPKN QESNLQAWDA ADEHLIKHLK ETEQVPVATA IINDNFGALT
ACLRSMESQW PLAVETDAKT SQLGTVQNLE NNTLSSDNIQ WLNSRENIPG AIELVLMKLP
KNLSYFAHQL NRLSQVLPEG TQVLIGAKAK SINKSLLELF AKNLGPASAS LTWKKTRVIT
CTADGKVRAL PTESQWSIPD LNLNITNLSN VFASGKLDIG ARIMLDNMPK GDFKSIIDLG
CGNGVLGLNA KQLFPQAYIH FVDDSEMAVE SARQNWALNK LDTLGLVGEQ ATFGWDDCLT
HLNEGIRPEL ILCNPPFHQG EAITDHIAWQ MFLQSWRALK NGGILHVVGN RHLAYHVKLQ
RIFKNCTTVA SNGKFVILQA QKISKKAEPH ENGESSSDTP NPQSSLYGGV KR
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