| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3435 |
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| Symbol | |
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| ID | 5613527 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 4185545 |
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| End bp | 4186240 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640934375 |
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| Product | 2OG-Fe(II) oxygenase |
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| Protein accession | YP_001475167 |
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| Protein GI | 157376567 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3145] Alkylated DNA repair protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTATTG CTTGTGGCTG GTATAGAGCT TATCGGGTTG AGGGATTGGA GAATGAGATG
AAACAACAAG GTTTGGGATT AGGTGCTCCT CAAGACTCAG GTGTTAACGC CCCAGAGGCA
CCGATTAAAC TTATTCGGGG CTACCTTAAC GAAGCACAAC AGACAGCCTT ATTGGAGGAA
GCGAGTGCTT ACCCTCTGTC CAGCCCCATT ATCAAGATCT ATGGGAAGCA ACATGCCATC
CCAAGAGCGC AAGTTTGGTT CGGTAATGAA GGTTGTGACT ATCTCTATTC AGGCCTGTTC
ATTGAAGCGT TGCCATGGCC GAAATATGCA CGTCTGCTAC AACAAAAATT GAAGCGTGAC
TTTGGTTTAA ATGCTAATGG CGTCCTGGTC AACCGTTATG CTGATGGCAG TGATTCTATA
GGCTGGCATA GTGATGACGA GCCCGAGATA GCTAATGGCA GTGATATTGC TTCTGTGACG
CTGGGGGCGA CACGTGACTT CTTTATTCGT CATAAATCAA GTCATCATAA GATTAATATT
TCGCTGGAGA GTGGCGATCT CTTGCTGATG CAATGGCCGA TGCAGAAGGA ATGGGAACAT
AGCCTGCCTA AGCGAATGAA GGTTATGGAG CCCAGGCTTA ATTTTACCTT TAGGACCTTA
GTTAAAGATT TCCATAAAGA GATCACAATG GACTGA
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| Protein sequence | MTIACGWYRA YRVEGLENEM KQQGLGLGAP QDSGVNAPEA PIKLIRGYLN EAQQTALLEE
ASAYPLSSPI IKIYGKQHAI PRAQVWFGNE GCDYLYSGLF IEALPWPKYA RLLQQKLKRD
FGLNANGVLV NRYADGSDSI GWHSDDEPEI ANGSDIASVT LGATRDFFIR HKSSHHKINI
SLESGDLLLM QWPMQKEWEH SLPKRMKVME PRLNFTFRTL VKDFHKEITM D
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