Gene Ssed_3433 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsed_3433 
Symbol 
ID5613525 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sediminis HAW-EB3 
KingdomBacteria 
Replicon accessionNC_009831 
Strand
Start bp4184384 
End bp4184683 
Gene Length300 bp 
Protein Length99 aa 
Translation table11 
GC content47% 
IMG OID640934373 
ProductBolA family protein 
Protein accessionYP_001475165 
Protein GI157376565 
COG category[T] Signal transduction mechanisms 
COG ID[COG0271] Stress-induced morphogen (activity unknown) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGTAG AACAGATCAT TACCGAAAAA CTCACCGCGG CTCTGTCTCC ATCTCACTTA 
GAGGTGATTA ACGAGAGTCA TAATCACCAT GTGCCACCGA ATTCAGAGAC ACACTTTAAG
GTGATCATTA CCTGTGGCTC ATTTGAGGGC AAACGTTTAT TAGCACGTCA CCGTGCGGTA
AATGAGGCTT TAGTGACTGA GTTTGCGAAT GGTTTACACG CACTATCTAT GCATACTTTT
ACGCCGACAG AATGGGCAGA AGAAGGCGAC CTACCAGCCT CGCCGAAGTG TAAGGGCTGA
 
Protein sequence
MSVEQIITEK LTAALSPSHL EVINESHNHH VPPNSETHFK VIITCGSFEG KRLLARHRAV 
NEALVTEFAN GLHALSMHTF TPTEWAEEGD LPASPKCKG